Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01560 ATGACATCAATTATTGTTAAGCTATTCTTTTCCCTCTATTTATTTTCTTCCCTTTTCTCAATATCATCATCATCTTCTTCGTCTATAGATTTTTTGTGTAATCAAACTCCTCATCCAAAGCCATGCAAATACCACATGAGCCACAGTTACCACCGATTCAGACCAAACCATCCGTCAGAGTTCAAGAAAATGCTGGTTCAATTAGCACTAGAACAAGCCCAAGCCATGCATAAAGAAGCTCAAGAATATGGCCCTAAATATGTCACCAAGATGCATAAATGTGTATTCAGTGATTGTTTAAAGCTTTACGACAAGACCATCTTCCATCTAAACCGAACCCTTCAAAGCCTACACAAAAATTCTTGCTCTCTATCAGACACACAAACATGGCTCAGTACTGCCCTCACAAACATCGAAACTTGCCGGAGCGTCGCGTTACAGCTTGGAGTCGGAGAGTTTACATCTCAAAATAATGTGAGCGACAACGTTAAAAAGATGATAAGCAATGTGTTGGCTGTCAATGGGAAATTCCTGAAGCAAGATAGTTACGCAGAAGAAGAGATCAAAGCTCATGGGTTTCCGAGTTGGTTTTCTTGGCACGACAGAAGGTTGTTGAGTTTGAAGCCATCTTCTGTTAAGGCAAATCTTGTGGTGGCTCAAGATGGGACGGGGCATTTTAAGACAGTGCAAGCCGCCATTGATGTAGCTTCAAGGAGAAAACTGAAAACGAGGTTTGTGATAAGAGTGAAGAAAGGGATTTATGAAGAGAATATTGAAGTTGGTACGGATAACGAAAATCTCATGATTATTGGTGATGGACTGGGACTCACCATTATAACTGGTGGTAAAAGCGTCAAAGAAGGAATTACTCCTTCTATGTCTGCAACTGCAGGTGTCGATGGTGCTAACTTTATTGCACAAGATATCACTTTTAGAAACACGGCTGGTCCTGAAAATGGTCAAGCTGTGGCGCTCCGATCAGCCTCCGACCTCTCGGTCTTCTACCGGTGCTCCATTGAAGGCTATCAGGACACTCTAATGGCCGATTCACAACGTCAATTCTATCGAGATTGTAGAATTTTTGGCACAGTGGATTTCATTTGGGGAAATGCTGCGGTTGTTCTACAAAATTGTACAATTCTCGTAAGAAAGCCACTTCAAGGACAACCAAACATGATCACAGCACAAGGACGAGACGACCCGTTTCAAAACACCGGAATAGCAATAATCAGTTCTCAAATCCGAGCAGCGCCGGATTTCAGGCCGGTTTATCACTCATTTGAAACCTACTTGGGTCGGCCATGGCACCAATATGCTCGAGTGGTTGTCATGAAAACTTATATTGAAGGCTTGGTAAATCCATTGGGATGGTCTCGATGGGACAATAGTGCCGCTGGTGAAAATACAAGTTACTTTGGGGAATATATGAACTATGGGGCTGGTTCATCTACAAAAGGTAGAGTACAATGGCCTGCCTTTCATGTCATAACTAATCCAAATGAGGCAAACCAGTTTAGTGTTGCTAGCTTCCTTGCTGGTGGCACATGGTTGCCTCGCACTGGGGTCCCTTTTACTATTGGTGTTAATTAA 1590 0.4264 MTSIIVKLFFSLYLFSSLFSISSSSSSSIDFLCNQTPHPKPCKYHMSHSYHRFRPNHPSEFKKMLVQLALEQAQAMHKEAQEYGPKYVTKMHKCVFSDCLKLYDKTIFHLNRTLQSLHKNSCSLSDTQTWLSTALTNIETCRSVALQLGVGEFTSQNNVSDNVKKMISNVLAVNGKFLKQDSYAEEEIKAHGFPSWFSWHDRRLLSLKPSSVKANLVVAQDGTGHFKTVQAAIDVASRRKLKTRFVIRVKKGIYEENIEVGTDNENLMIIGDGLGLTIITGGKSVKEGITPSMSATAGVDGANFIAQDITFRNTAGPENGQAVALRSASDLSVFYRCSIEGYQDTLMADSQRQFYRDCRIFGTVDFIWGNAAVVLQNCTILVRKPLQGQPNMITAQGRDDPFQNTGIAIISSQIRAAPDFRPVYHSFETYLGRPWHQYARVVVMKTYIEGLVNPLGWSRWDNSAAGENTSYFGEYMNYGAGSSTKGRVQWPAFHVITNPNEANQFSVASFLAGGTWLPRTGVPFTIGVN 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01560 529 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 27 178 IPR035513 -
Accr13g01560 529 SUPERFAMILY Pectin lyase-like 212 527 IPR011050 -
Accr13g01560 529 PANTHER PECTINESTERASE 15 518 - -
Accr13g01560 529 CDD PMEI-like_3 32 179 - -
Accr13g01560 529 Gene3D - 209 528 IPR012334 -
Accr13g01560 529 Pfam Plant invertase/pectin methylesterase inhibitor 28 172 IPR006501 GO:0004857
Accr13g01560 529 Pfam Pectinesterase 215 513 IPR000070 GO:0030599|GO:0042545
Accr13g01560 529 NCBIfam pectinesterase inhibitor domain 9 175 IPR006501 GO:0004857
Accr13g01560 529 Gene3D Invertase/pectin methylesterase inhibitor family protein 23 177 IPR035513 -
Accr13g01560 529 FunFam Pectinesterase 209 528 - -
Accr13g01560 529 SMART PMEI_2 24 173 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01560 Accr-Chr13 26434114 26435795 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01560 20 525 Carbohydrate Esterase AT5G51500 53.516 0.0 548