Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01548 ATGAAAACTCCTTCGCTTTTCCCTCTCACATTCTTCTTCTTCTTCTTCTTCTGTCAGATACAGCTTCTGGTTTTTTCTGCTACATCATCTGTCATCTTCTCTTTGCTTTCTCTCAAGTCTTCCCTCATTGACCCTCACAGTACCCTCCATGACTGGAACTATTCTTCTTCTTCTTCCTCCTCAAACAATTCTTTCCCAGAACCACCACATGTTTGGTGTTCATGGTCAGGTATCACGTGCCACGCACGGACTTCTCAGATCATAGCCATTGACCTTTCTCAGCGTAATCTCTCTGGTTCAATCTCCCCCCAAATCCGTTTCTTGACCAGCTTGAACCACTTGAATCTCAGCTGGAATGACTTCACTGGGATTTTCCCACCTGTGATTTTTGAACTCTCTGAGCTCAGAACTCTGGATATCAACCACAACTACTTCAATTCAACTTTCCCTCCAGGGATTTCCAGGCTCAAGTTCTTAAGAGTGTTCAATGCTTATAGCAATAACTTTATTGGTCCTCTGCCTCAGGAATTCATGAGGCTTCGGTTTCTTGAGAAGTTGAACCTTGGTGGGAGCTACTTCAATGGTACAATTCCTTCTGGTTATGGTAATTTACCACGATTGAAGTTTCTTTATCTTGCTGGGAATCTCATAGAAGGTTCAATACCATTTCAATTAGGGTTCTTATCAGAATTGGAACGTCTTGAAATTGGGTACAACCGGTTTTCTGGAGGATTACCTGAAGAATTTGCATTATTATCAAGTCTGAAATACTTGGATATTGCTTCTTCTAATCTCTCCGGCTCTCTAATTCATGATTTGGGAAACATGACTATGTTGGAGACATTGTTGCTGTACAAGAATCAGTTAGTGGGTGAGATCCCATCGAGCTTGGGGAATTTGAAAAGTCTCAATGCACTTGATTTGTCAGATAACAAACTCAGTGGGTCAATTCCTGAAGAAATTTCAATGTTGAAGGAGCTAACCATGTTGAGCTTGATGAATAACAAGTTAACGGGAGTGATACCACAAGGAATCGGAGATCTTCCAAAACTCTATACTCTGCTTCTGTGGAACAATTCGCTTTCTGGAATTCTCCCACAAACCCTTGGTTCCAATGGACTACTCCAAAAACTCGATGTTTCCACGAATTTACTCACAGGTTTGATTCCATCAAGTGTTTGCAATGGAAGCAAGCTTATCAAGCTCATTCTCTTTGATAACGAATTTGAAGGACCTTTTCCAGAATCACTCACTAATTGCACTTCACTGGTAAGGCTTCGAATCCAAAACAATCGTCTCAATGGATCAATCCCCGGTGGTTTTGGCCTTCTTCCGAATCTTGCCTTCGCCGATATGAGCAACAACAACTTCACGGGACGAATTCCAGAAGATTTCGGTGATGCTCCGACATTGCAACACTTGAATCTCTCTGGGAATTCATTCGAAAATCCATTACCAAGCAATATTTGGAATGCTAGGAATCTACTTGTTTTCTCGGCGATTTCATCGAAAATTAACAGTCAGATTCCAGATTTCGTAGGGTGCAAGAACATTTACAGGATCGAATTGCAGGGGAATTTCATCAATGGTAGCATCCCATGGACAATTGAGAACTGCGAGAGGCTTATTGTGTTGAATCTGAGTCATAATTCTCTTTCTGGTATCATCCCCTGGGAAATCTCCGTTTTACCCTCAATCACTGATGTTGACCTATCGCACAATTTTCTCTCCGGCACCATACCCTCCGGTTTCAACAACTGCACCACACTCGAGAACTTCAACGTCTCCTTCAATTCCCTCACCGGACCAATTCCTTCCGCCGGTTCAATCTTCCCGAACCTAAATCCATCCTCCTTCTCCGGCAACGATGGCCTCTGCGGCGGCGTTATAGCAAAACCCTGCGCTATGGACACTACTCTCTCCCCTGCAACGGACGAACAACAATATCATCCTAAGAGAACCACCGGTGCAGTGATGTGGATCGTTGCAGCGGCGGTGGCGGTCGGATTGTTCGCTCTAGTCGCCGGAACCCGATGCTTCCGGTCTCATCACAGCCGTACATTCATAAACAACCGCGAGATCGGGCCGTGGAAATTAACCGCGTTCCAACGGTTGAATTTCACAGCAGAGGACGTGGTAGAGTGCATGACAGTCTCGAACAAGATTATAGGGATGGGGTCCGCTGGAACAGTGTTCAAAGTGGAGATGCCAGGTGGCGAGACCATAGCCGTTAAAAAGCTATGGGGCAAGCAAAAGGCGACCTCTAACATCATCCGACGGCGGAGAGGGGTGCTAGCTGAAGTGGATGTATTAGGGAACGTGAGGCACAGGAACATAGTGAGATTGTTAGGGTGTTGCTGCAACAGGGAGAGCACAATGCTGCTCTATGAGTATATGCCCAATGGGAATTTAGAAAACTTGTTACATGGCAAAGACGTGGTTGGTGATTGGTTGACAAGGTACAACATAGCATTAGGGGTGGCACAGGGGATTTGTTATCTTCATCATGATTGTGATCCAGTGATTGTTCATCGAGATCTCAAACCGAGTAATATCTTATTGGATGCTGAGATGGAGGCCAGAGTGGCAGATTTTGGAGTGGCCAAGTTGATTCAAAGTGATGAATCCATGTCTGTAATTGCAGGATCATATGGCTACATTGCTCCTGAATATGCATACACTCTACAAGTTGATGAGAAGAGTGATATTTATAGCTATGGGGTGGTGCTGATGGAGATTTTATGTGGAAGAAGATCGGTCGAAGCTGAGTTTGGCGATGGCAATAGTATTGTGGATTGGGTTAAGTCAAAGATCAAGACTAAAAATGGGGTTGATTATGTATTAGATAAGAATGTCGGAGCCGGTTGTGCTCCGGTGAGGGATGAGATGATGCAGATGCTCAGGATCGCAATGCTTTGTACTAGCCGGAATCCGGCGGATCGGCCTTCCATGAGAGATGTTGTGATGATGCTTCAAGAGGCCAAGCCAAAGAGGAAGATGTTTGATAATATTGTGTTAGGACAATGTGGTGATAAAGATATTAGTAGTGGTGGGGAGGATGATGATATTGTTTTGCCTCAAAAGGCAAAAGTGGAAATTTAA 3102 0.4429 MKTPSLFPLTFFFFFFFCQIQLLVFSATSSVIFSLLSLKSSLIDPHSTLHDWNYSSSSSSSNNSFPEPPHVWCSWSGITCHARTSQIIAIDLSQRNLSGSISPQIRFLTSLNHLNLSWNDFTGIFPPVIFELSELRTLDINHNYFNSTFPPGISRLKFLRVFNAYSNNFIGPLPQEFMRLRFLEKLNLGGSYFNGTIPSGYGNLPRLKFLYLAGNLIEGSIPFQLGFLSELERLEIGYNRFSGGLPEEFALLSSLKYLDIASSNLSGSLIHDLGNMTMLETLLLYKNQLVGEIPSSLGNLKSLNALDLSDNKLSGSIPEEISMLKELTMLSLMNNKLTGVIPQGIGDLPKLYTLLLWNNSLSGILPQTLGSNGLLQKLDVSTNLLTGLIPSSVCNGSKLIKLILFDNEFEGPFPESLTNCTSLVRLRIQNNRLNGSIPGGFGLLPNLAFADMSNNNFTGRIPEDFGDAPTLQHLNLSGNSFENPLPSNIWNARNLLVFSAISSKINSQIPDFVGCKNIYRIELQGNFINGSIPWTIENCERLIVLNLSHNSLSGIIPWEISVLPSITDVDLSHNFLSGTIPSGFNNCTTLENFNVSFNSLTGPIPSAGSIFPNLNPSSFSGNDGLCGGVIAKPCAMDTTLSPATDEQQYHPKRTTGAVMWIVAAAVAVGLFALVAGTRCFRSHHSRTFINNREIGPWKLTAFQRLNFTAEDVVECMTVSNKIIGMGSAGTVFKVEMPGGETIAVKKLWGKQKATSNIIRRRRGVLAEVDVLGNVRHRNIVRLLGCCCNRESTMLLYEYMPNGNLENLLHGKDVVGDWLTRYNIALGVAQGICYLHHDCDPVIVHRDLKPSNILLDAEMEARVADFGVAKLIQSDESMSVIAGSYGYIAPEYAYTLQVDEKSDIYSYGVVLMEILCGRRSVEAEFGDGNSIVDWVKSKIKTKNGVDYVLDKNVGAGCAPVRDEMMQMLRIAMLCTSRNPADRPSMRDVVMMLQEAKPKRKMFDNIVLGQCGDKDISSGGEDDDIVLPQKAKVEI 1033
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01548 1033 FunFam Leucine-rich repeat receptor-like protein kinase 30 199 - -
Accr13g01548 1033 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 685 798 - -
Accr13g01548 1033 FunFam leucine-rich repeat receptor-like protein kinase TDR 799 1003 - -
Accr13g01548 1033 FunFam Leucine-rich repeat receptor-like protein kinase TDR 321 636 - -
Accr13g01548 1033 Gene3D Ribonuclease Inhibitor 33 323 IPR032675 -
Accr13g01548 1033 Pfam Leucine rich repeat 422 480 IPR001611 GO:0005515
Accr13g01548 1033 Pfam Leucine rich repeat 279 337 IPR001611 GO:0005515
Accr13g01548 1033 Pfam Leucine rich repeat 517 574 IPR001611 GO:0005515
Accr13g01548 1033 Gene3D Transferase(Phosphotransferase) domain 1 799 1008 - -
Accr13g01548 1033 ProSiteProfiles Protein kinase domain profile. 717 1001 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01548 1033 ProSitePatterns Serine/Threonine protein kinases active-site signature. 842 854 IPR008271 GO:0004672|GO:0006468
Accr13g01548 1033 SMART LRR_typ_2 348 371 IPR003591 -
Accr13g01548 1033 SMART LRR_typ_2 563 586 IPR003591 -
Accr13g01548 1033 SMART LRR_typ_2 132 156 IPR003591 -
Accr13g01548 1033 SMART LRR_typ_2 300 324 IPR003591 -
Accr13g01548 1033 SMART LRR_typ_2 204 228 IPR003591 -
Accr13g01548 1033 SMART LRR_typ_2 108 127 IPR003591 -
Accr13g01548 1033 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 252 993 - -
Accr13g01548 1033 Gene3D Phosphorylase Kinase; domain 1 688 798 - -
Accr13g01548 1033 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 222 317 - -
Accr13g01548 1033 SUPERFAMILY Protein kinase-like (PK-like) 720 991 IPR011009 -
Accr13g01548 1033 ProSiteProfiles Leucine-rich repeat profile. 302 324 IPR001611 GO:0005515
Accr13g01548 1033 SUPERFAMILY L domain-like 317 626 - -
Accr13g01548 1033 SMART serkin_6 717 995 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01548 1033 Gene3D Ribonuclease Inhibitor 324 640 IPR032675 -
Accr13g01548 1033 Pfam Protein kinase domain 720 988 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01548 1033 SUPERFAMILY RNI-like 90 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01548 Accr-Chr13 26068590 26073090 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01548 13 999 Receptor kinase-like Gene Family AT1G08590 43.153 0.0 766
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr13g01548 Pkinase 2.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01548 - - pcin:129315664 1481.85