Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01546 ATGGCTGATTCACGGGTTACTTCTGTGCAAAGCCCTCACTTTCAACACCCAACCGCTGGCATCATCAAGAGGGTTCGATTGGAGAACTTCATGTGCCATAGCAACCTCGAGATTGAGCTCGGAGAGTGGGTTAATTTCATTACTGGTCAAAATGGAAGTGGTAAGAGCGCAATCCTAACTGCATTGTGTGTTGCATTTGGATGTCGAGCAAGAGGGACTCAGAGAGCGGCGACTCTGAAGGATTTCATTAAAACTGGCTGCAGTTCTGCTGTCATCCACGTGGAAATAAAAAATGAAGGAGAGGATGCTTTTAAGCCCCAAATATATGGTGATATGATCACTGTAGAACGTAGGATATCTGAATCCACAAGCTCCATCGTGTTAAAAGACTACAGAGGAAAGAAGGTGGTCAGCCGGAAAGCAGAACTCCAGGAAATGGTTGAGCATTTTAATATTGATGTAGAGAATCCATGTGTTGTTATGAGTCAAGACAAAAGCAGGGAATTTTTGCATTCAGGGAATGACAAGGATAAATTTAAGTTCTTTTACAAGGCTACGCTTCTTCAGCAAGTTGATGATCTTTTGGAAAGCGTTTCTAAAGGACTAGAGCATTCATTTGGACTTCTTGGAGGATTAGAGGCTACAATAAGGCCTGTAGAGAAGGAGCTAAACGAGTTAAGGGTTAAAATTACAAATATGGAACAAGTTGAACAAATATCATTGCAGATTCAGCAGTTAAAGAAAAAACTTGCGTGGTCATGGGTTTTTGATGTGGACAAACAAATCCAGGGACAATGTTCAAAGCTCGATAAATTAAAGGATCGAATACCTAAGTGTCAATCCAAAATTGATGACCAATTGAATATGGTTGAAGAATTGAGGGCATGTTTACATAAGAAGAAAGGTCATATCAAAAACTTGTTTGAAAAGACTTCTGAGGTGAAGCAGAAGAAGCAAAATTTACAACAATCTATATCTATGGCTGCAAAACAACTACTTGAAAAAGAACAACAGTGCAAACGCATAACTGTCAGTATTGAGAAGATGGTAAGGCGTGTTAGGACTTTGGAAGAACAGGTGCAGGATATTTATGAGAAGCATGCACAAAGTACTCAGGCTGAAGAATCTGAGATAGAGGAGAAATTGAAGGTGCTACAAAATGATGTTGATGCTGCTGAATCAGCTTTGACAAGGTTGAGGGAAGAGGAAGCTATACTAGCTGACAATGTACAAAGACAAAGTAATGAAATAAGAAAGATTGCTGATGAGATTGAAGGACACGATAGACGGTATCGTGAAATCAACTTTTCTATCCGTGAGCTTAAACAACACCAAACCAATAAGGTTACAGCTTTTGGAGGAGATAGAGTGATGAACCTACTGCGTATTATTGAGAGAAGCTATCGGAGGTTTAAGAGGCCACCCATTGGTCCAATTGGCGCCCATTTGAGCCTGGTTAATGGCGATAGGTGGGGTGTTGCTATTGAGCATGCAATTGGGAAGATGCTGAATGCTTTTATAGTGACTGATCACAAGGATTCTCTTCTTTTGAGAGAATGTGCAAAGGAAGTAAACTACGGTTACCTCCAAATTTTCATTTATGATTTTTCAAGACCACGATTGTCCTTACCAGCGCACATGCTTCCTCAGACAACTCATCCTTCGATTCTTTCTGTTTTATATTCGGCAAATGACACTGTGATTAATGTCCTAGTGGATCTGGGGAGCATTGAGAGACAAATTCTTGTTAGGGATTATGATACCGGTAAAATGGTTGCATTTGACGAAAGGATTTCAAATCTGAAGGAGGTCTTCACCTCGGATGGATGTAAAATGTTTTCTCGGGGCCCAGTGCAGACAGTTCTTCCCCCAAATAAGAGGCAGAGAACTAGCCGACTATGTAGTTCTTTTGATAATCAAATTAATGTTCTTGAAGCTGATGCTTCCCACGAACAAGAAGCAGCTAATCGCTTAAAGAGAATTAAAAGGGAGGCTGAAGAAAAGCTTGAGGATCTTAATGGGAGGCTAAGACATGTGAAGAGGGTCTGTTCAAATTCAGAGAAGGATTTGTCTTCTAAGAAATTAGCACTCGAAGATGAGAGGAACCAGTATGCGATGGCAAATCGTTCATCACCTGCATCATCTGTGGATGAGATTCAACAAGAAATTTCCGAAGCCCAACACGAAATAGAAAGGAAGACCGACTTGTTGAAAGAATGTCAGAACAGGATGAATGAAGCAGCAGCGAAGACAGATCATCTTAAAATATCATTTGAAGAACTATGTGCATCAACCCAAGAGGAGATTAGTGCCCTTGAGAAAGCAGAGAATGAACTAATGCAGATTGAACGGGACATGCGTTTAGCAGAAGAGGAGAAGGCTCATTATGATGGGATAATGCAACACAAGGTACTCCCGGATATAAAGGAGGCAGAGGCACGCTATCTGGAGCTCAAGCAGCAACGAGAGGACTACAGCAGAAAGGCTTCTATAATTTGTTGTGAGGATGAACTTCAGTCTTTTGGAGATTGCAATGGAAGCACCCCAGAGCAACTCAGCGCACAGATAGAAAGACTAGCTCAGAGACTCAAGCGTGAGAGTCAAAGATACACAGAATCACTAGATGATCTTAGGATGCTGTGTGAGAAAAAAGAACGCAAGATTATGAGAAAGCAGCAAGCTTACAAAGCCTATCGAACAAAGTTAGATGCTTGTCAGAGAGCCTTAGAATTACGGAGGAACAAGTTCCGCAGAAATGCAACTTATTTGAGGCGTTTGTTGTCTTGGAAATTTAATGCCCATTTGGGAAGAAAAGGATTCAGTGGACTTATCACAGTCAATTATGAAGAAAAAACCCTTTCAATCAAGGTGCAAATGCCTCAAGATGCGTCAGGATGTGCTGTTCGTGACACTCGAGGCCTTTCAGGCGGCGAGCGTTCGTTTTCAACATTATGCTTTACACTAGCCCTTCATGATATGACAGAATCCCCTTTCCGCGCAATGGATGAATTTGATGTTTTTATGGATGCTGTCAGTCGAAAGATCAGCTTGGACACTCTCGTGGACTTTGCTGTTGAACAAGGATCCCAGTGGATATTTATTACCCCACATGATATTAGTATGGTTAAGCAGGGAAACAGGATAAAGAAGCAGCAAATTGCAGCACCCCGTTCTTGA 3177 0.4142 MADSRVTSVQSPHFQHPTAGIIKRVRLENFMCHSNLEIELGEWVNFITGQNGSGKSAILTALCVAFGCRARGTQRAATLKDFIKTGCSSAVIHVEIKNEGEDAFKPQIYGDMITVERRISESTSSIVLKDYRGKKVVSRKAELQEMVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKATLLQQVDDLLESVSKGLEHSFGLLGGLEATIRPVEKELNELRVKITNMEQVEQISLQIQQLKKKLAWSWVFDVDKQIQGQCSKLDKLKDRIPKCQSKIDDQLNMVEELRACLHKKKGHIKNLFEKTSEVKQKKQNLQQSISMAAKQLLEKEQQCKRITVSIEKMVRRVRTLEEQVQDIYEKHAQSTQAEESEIEEKLKVLQNDVDAAESALTRLREEEAILADNVQRQSNEIRKIADEIEGHDRRYREINFSIRELKQHQTNKVTAFGGDRVMNLLRIIERSYRRFKRPPIGPIGAHLSLVNGDRWGVAIEHAIGKMLNAFIVTDHKDSLLLRECAKEVNYGYLQIFIYDFSRPRLSLPAHMLPQTTHPSILSVLYSANDTVINVLVDLGSIERQILVRDYDTGKMVAFDERISNLKEVFTSDGCKMFSRGPVQTVLPPNKRQRTSRLCSSFDNQINVLEADASHEQEAANRLKRIKREAEEKLEDLNGRLRHVKRVCSNSEKDLSSKKLALEDERNQYAMANRSSPASSVDEIQQEISEAQHEIERKTDLLKECQNRMNEAAAKTDHLKISFEELCASTQEEISALEKAENELMQIERDMRLAEEEKAHYDGIMQHKVLPDIKEAEARYLELKQQREDYSRKASIICCEDELQSFGDCNGSTPEQLSAQIERLAQRLKRESQRYTESLDDLRMLCEKKERKIMRKQQAYKAYRTKLDACQRALELRRNKFRRNATYLRRLLSWKFNAHLGRKGFSGLITVNYEEKTLSIKVQMPQDASGCAVRDTRGLSGGERSFSTLCFTLALHDMTESPFRAMDEFDVFMDAVSRKISLDTLVDFAVEQGSQWIFITPHDISMVKQGNRIKKQQIAAPRS 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01546 1058 SUPERFAMILY Methyl-accepting chemotaxis protein (MCP) signaling domain 277 445 - -
Accr13g01546 1058 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES 5,6 SMC5, SMC6 15 1057 - -
Accr13g01546 1058 Coils Coil 716 750 - -
Accr13g01546 1058 Coils Coil 808 828 - -
Accr13g01546 1058 SUPERFAMILY Smc hinge domain 431 596 IPR036277 GO:0005515|GO:0005524|GO:0005694|GO:0051276
Accr13g01546 1058 Coils Coil 648 682 - -
Accr13g01546 1058 Coils Coil 346 366 - -
Accr13g01546 1058 Coils Coil 853 901 - -
Accr13g01546 1058 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 21 1045 IPR027417 -
Accr13g01546 1058 Coils Coil 304 338 - -
Accr13g01546 1058 Pfam RecF/RecN/SMC N terminal domain 22 1048 IPR003395 -
Accr13g01546 1058 Gene3D - 809 1053 IPR027417 -
Accr13g01546 1058 Coils Coil 765 792 - -
Accr13g01546 1058 Coils Coil 368 430 - -
Accr13g01546 1058 Gene3D - 22 272 IPR027417 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01546 15 1058 Structural Maintenance of Chromosomes family AT5G61460 60.441 0.0 1248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01546 K22804 - zju:107414226 1399.42