Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01536 ATGGACAAGCATAGAACTGACGCTTACCTTGCAGTTCAAGCTACATGTATGCTTTTCTTGGCATTTTGTGCAGTAACTTTTGGAGAGACAGAAACAGAGGCCCTTCTCAGGTGGAAAGAAAGTCTTCCAGATCAACCAATTCTGGAGTCATGGGTCTCCCCGGCACAGAACTCAAGTGCAGCTCAAAGCCCATGTTCATGGCTAGGAATAACATGTGATAATTCCTCAGGAAGTGTGATTGCAATAAACTTGGCTTACACTGGGCTTCAAGGTACCCTCCAAAACTTGAACTTCTCTGCATTTCCAAATCTTCTCCGACTTGACCTCAAAACAAACAACCTCATCGGCAGTATACCAGAAAACATTGGTGTGCTCTCAAAACTGCAATACCTTGACCTTTCCACAAATTACCTCAACGGCACTTTACCTCTTTCTCTTGCTAATTTGACTCAAGTTTACGAGTTTGATGCTTCACGAAACAATATTACTGGAATATTAGATGCTCGTCTTTTTCCTGATGGTTCTGATCAACCCAAGACTGGACTGATAGGAATCAGAAATCTTCTCTTTCAGGACACCCTGCTTGGTGGTAGAATTCCAGATGAAATAGGATATATGAGAAATTTAACTGTGCTAGCTTTAGATGGGAATAGCTTCTATGGACCTATTCCCCCATCTCTAGGGAACTGTACACATTTAAGTGTTCTTAGGATGTCTGGAAACCAACTCTCAGGCATGGTTCCTCCTAGTTTTGGTAGATTGACTAATCTATCTCAGGTGTTCCTCCACATAAATAATTTACAGGGTCCTGTGCCACAAGAATTAGGAAACTCTTCTTCTTTAATTGTCCTGCATCTTGCTGAAAACAACTTCACTGGAGACTTACCACCACAAGTTTGCAAAGGTGGCAAGCTTGTGAATTTCAGTGCTTCCTACAATAGTTTCACTGGTCCAATCCCAATAAGCCTGAGAGATTGCCCATCCTTGTATAGGGTTCGGATGGAATATAATCAATTAAGGGGTTATGCAGATCAAGATTTTGGAGTGTACCCTAATCTTACTTACATGGACTTCAGCTACAATAACGTGCAAGGTGAGCTCTCTTCAAATTGGGGAAACTGCAAAAACTTGCAATACCTTGGTATGTCTGGAAATTCAATAGGCGGTACTATACCTGATAAGATTTTTCAGCTGAACCAACTTGTAGAGCTACATTTGTCTTCCAATAAAATATCAGGGGAGATTACCCAACAAATAGGGAATTCCTCCAGCCTTTCACCTCTATCTTTGAGTAGCAACAGACTTTCAGGATCCATACCTGTGGGCATTGCAAAGTTATCTAACTTGAGAACATTAGACTTGTCAACAAACATGCTAAGAGGACCAATCCCTTATCAGATAGGGGATTGCTCAAACTTGCTGAGTTTAAATTTGAGCAACAATAACTTCAATGGAACAATCCCATACCAAATTGGAAATCTGGCAGCCTTACAAGATTTGTTGGACTTGAGTTACAATTCACTTTCTGGTCAAATTCCAGATGATCTTAGCAAGCTGAAAAATTTGATCAGCTTGAACATCTCTCACAACAATCTATCTGGGTCTATCCCAGACTCCCTTGGTGAAATGTTGAGTTTGTCAAGCATCAACCTCTCCAACAACAATTTGGAGGGTCATGTACCGAATACTGGCATATTTAATTCTTCCAATCCAGTGGATTTACGCAACAACAAAGAGTTATGCGGGAATATACAAGGCCTACAACCTTGCAATGTCTCATACATGGAACCTAGAGGTGGAAGCAACAAAGAGAAAGTTATAGCAGCAATTGTTGCTTCTTTGGGTGGTACACTGCTCGTTTCATCATTGTTAGTTTGCATTTTTGTTTTTGGCTGTAAGACACGATCAATGAAACAGAATTCTGCACCAGAGAGAAAAAGTCCATTTTCAATATCGTATTTCAATAGAAGAATTGTTTATGAAGATATAATTGAAGCTTCCAATAACTTTGACGACACCTACTGTATTGGAGAGGGAACATTAGGAAAAGTTTACAGAGTGGTGTTGCCAGGAGGTCAAGTAGTTGCAATAAAAAAGTTACGATGTGAAGAAAACAATTTAGATATTGAAAGTATAAAATCCTTTAGAAGTGAGATAGAAGCCATGACTGGAACACGTCACCGGAACATTGTGAAGTTATATGGGTTTTGCTCAGACCCCTCACTCACATTTTTGATTTACGAGTACATGGAAAGAGGGAGCTTAAACGATATGCTGAGAGATAACGAAAAAGCTACAGAGCTAGTTTGGCCAAAGAGAGTTGAAATTGTTAAAGGAGTAGCACAAGCTTTATCTTACATGCATCATGATTGCAACCCACCAATAATCCACAGAGACATATCAAGCAAGAATGTATTATTGTCCAAAAATCTGGAAGCTCATATCTCGGACTTTGGCACAGCAAGGTTCCTGAAGGCAGATTCACATATTTGGACTTCATTTGCAGGCACATACGGCTATGCAGCTCCAGAGCTTGCATACACAAAGGCAGTGACTGAAAAATGTGATGTGTTTAGCTTTGGTGTTTTGGCTTTTGAGATTCTTACTGGAAAGCATCCAGGAGATCTAATTTCTCACATACAAACATATGGTGTTCAAAACTTCAACTTCAAAGAGATTTTAGACCCACGTCTCTCACCTCCTACAAAGCAAGAAAAATTGAAGGAATTGGCTTTGATTAGTAATCTGGCTATTTCTTGTTTACAAACAAACTCTCAATCACGACCAACTATGCGAAGCATAACTCACATGATTGAGATGGAGACAGCTCAAGATTCATGA 2841 0.3992 MDKHRTDAYLAVQATCMLFLAFCAVTFGETETEALLRWKESLPDQPILESWVSPAQNSSAAQSPCSWLGITCDNSSGSVIAINLAYTGLQGTLQNLNFSAFPNLLRLDLKTNNLIGSIPENIGVLSKLQYLDLSTNYLNGTLPLSLANLTQVYEFDASRNNITGILDARLFPDGSDQPKTGLIGIRNLLFQDTLLGGRIPDEIGYMRNLTVLALDGNSFYGPIPPSLGNCTHLSVLRMSGNQLSGMVPPSFGRLTNLSQVFLHINNLQGPVPQELGNSSSLIVLHLAENNFTGDLPPQVCKGGKLVNFSASYNSFTGPIPISLRDCPSLYRVRMEYNQLRGYADQDFGVYPNLTYMDFSYNNVQGELSSNWGNCKNLQYLGMSGNSIGGTIPDKIFQLNQLVELHLSSNKISGEITQQIGNSSSLSPLSLSSNRLSGSIPVGIAKLSNLRTLDLSTNMLRGPIPYQIGDCSNLLSLNLSNNNFNGTIPYQIGNLAALQDLLDLSYNSLSGQIPDDLSKLKNLISLNISHNNLSGSIPDSLGEMLSLSSINLSNNNLEGHVPNTGIFNSSNPVDLRNNKELCGNIQGLQPCNVSYMEPRGGSNKEKVIAAIVASLGGTLLVSSLLVCIFVFGCKTRSMKQNSAPERKSPFSISYFNRRIVYEDIIEASNNFDDTYCIGEGTLGKVYRVVLPGGQVVAIKKLRCEENNLDIESIKSFRSEIEAMTGTRHRNIVKLYGFCSDPSLTFLIYEYMERGSLNDMLRDNEKATELVWPKRVEIVKGVAQALSYMHHDCNPPIIHRDISSKNVLLSKNLEAHISDFGTARFLKADSHIWTSFAGTYGYAAPELAYTKAVTEKCDVFSFGVLAFEILTGKHPGDLISHIQTYGVQNFNFKEILDPRLSPPTKQEKLKELALISNLAISCLQTNSQSRPTMRSITHMIEMETAQDS 946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01536 946 FunFam MDIS1-interacting receptor like kinase 2 750 944 - -
Accr13g01536 946 PANTHER LEUCINE RICH REPEAT KINASE 2 227 942 - -
Accr13g01536 946 Gene3D Ribonuclease Inhibitor 111 178 IPR032675 -
Accr13g01536 946 Gene3D Ribonuclease Inhibitor 179 364 IPR032675 -
Accr13g01536 946 ProSitePatterns Tyrosine protein kinases specific active-site signature. 795 807 IPR008266 GO:0004672|GO:0006468
Accr13g01536 946 FunFam Nuclear pore complex protein NUP107 28 171 - -
Accr13g01536 946 Pfam Protein kinase domain 675 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01536 946 PRINTS Leucine-rich repeat signature 128 141 - -
Accr13g01536 946 PRINTS Leucine-rich repeat signature 446 459 - -
Accr13g01536 946 SMART serkin_6 670 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01536 946 FunFam Leucine-rich repeat receptor protein kinase EMS1 182 274 - -
Accr13g01536 946 SUPERFAMILY Protein kinase-like (PK-like) 644 939 IPR011009 -
Accr13g01536 946 SUPERFAMILY L domain-like 97 297 - -
Accr13g01536 946 FunFam Leucine-rich repeat receptor protein kinase MSP1 633 749 - -
Accr13g01536 946 Gene3D Ribonuclease Inhibitor 24 110 IPR032675 -
Accr13g01536 946 ProSiteProfiles Protein kinase domain profile. 670 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01536 946 Gene3D Ribonuclease Inhibitor 464 590 IPR032675 -
Accr13g01536 946 SUPERFAMILY RNI-like 246 568 - -
Accr13g01536 946 FunFam Leucine-rich repeat receptor-like protein kinase TDR 277 592 - -
Accr13g01536 946 Pfam Leucine rich repeat N-terminal domain 30 73 IPR013210 -
Accr13g01536 946 Pfam Leucine Rich Repeat 521 541 IPR001611 GO:0005515
Accr13g01536 946 Gene3D Ribonuclease Inhibitor 365 463 IPR032675 -
Accr13g01536 946 SMART LRR_typ_2 519 543 IPR003591 -
Accr13g01536 946 SMART LRR_typ_2 398 422 IPR003591 -
Accr13g01536 946 SMART LRR_typ_2 206 230 IPR003591 -
Accr13g01536 946 SMART LRR_typ_2 446 470 IPR003591 -
Accr13g01536 946 SMART LRR_typ_2 125 149 IPR003591 -
Accr13g01536 946 Gene3D Transferase(Phosphotransferase) domain 1 750 946 - -
Accr13g01536 946 Gene3D Phosphorylase Kinase; domain 1 632 749 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01536 Accr-Chr13 25039772 25042941 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01536 24 843 Receptor kinase-like Gene Family AT4G08850 40.652 0.0 621
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Accr13g01536 Pkinase 7.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01536 - - gmx:100814345 1320.84