Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01529 ATGATGGCCAGTTTCAGAGTTCTGTATCTATACTTCTTGCTACTCTGCTTCGTAGAGTCACTCACTTCACGAGACACGATCACTGAAGGAAACTTCATTAGAGATGGCGAGACTTTAGTTTCCTCAAACAGGTTTTTCGAACTTGGATTCTTCAGCCCTGGCTCTTCAACTCTCAGATACTTGGGAATATGGTACAGGGAATCTCCTTCCACAGTCTTCTGGGTCGCCAACCGAAACACATCCATCAACAACGTTAATGGAAAGGGCCTTTTACGATTAAATGATCAAGGGGTTCTTCTTCTTCTTGATGCTAAAAACAACACCATGTGGTCTTCCGACAATTCGTCAACCACTACCAGAATCAAAGCGTACAACCCTTTTGCCCAGCTCTTGGATTCGGGGAATCTGGTGGTGAAAAATGACGCCTTCGACCGATTGTGGCAGAGTTTTGATTATCCTTGTGATACCTTGATGCCTGGAATGAAGCTTGGGTGGGATCAAGAAACGGGTCTGGATAAAGTTCTGTCATCTTGGAAAAGCTCATATGATCCAGGTCAAGGAGATTACATATACAAAATAGACCGTAAAGGGTATCCACAATTATTTGCACTGAGAAGTTCCAAAGTGATGTTTAGACCTGGGTCATGGAATGGCATCACTCTTACATGGCTTCCAAATCATAATCCAAATCCTATATTTACTACTGAGTTTGTGGTGAATGAAAAAGAGGTGTACTTTACCTCTGAGCTGAGAAATAATTCGATTTTCTCCAGATTTGCAGTGAACCCGTCTGGGATTGGGCAGCGTTTTGATTGGGTAATTCAAACAAGCAGCTGGCAGTTATTGAGCACTGGTTCTATTGACCAGTGTGAAAATTATGCCTTGTGTGGTGCAAATTCTATCTGCAACATTAGTAACAATCCTGTTTGTGAATGCCTGAGAGGTTATGAACCCAAGAATTTTAAGGAATGGAATGTGTCTAATTGGAACAGTGGCTGCACTAGAAGGGTCTCTTTGGACTGTGGTGGTGGTGATGGGTTTAAGCAGTACACAAGCATCAAGTTACCAGACACCTCTTCTTCATGGTACAACACGACCATGAACCTTAAGGAATGTAAGAAAACATGTCTGCAAAACTGTTCTTGTGCAGCTTATTCGAATTTGGATATACGAGGTGAAGGAAGTGGCTGCCTCGTATGGTTTGATCACCTATTGGACATGAGACAATTTCCTGCAGGGGGACAAGACCTCTATGTACGACTTCCTGCTTCAGAGCTAGATCATTTTAGGGATGAAGGCCGTGGGAGCATTGGCAAGAAGAAGCTAGCAGGAATTGTGGTTGGCTGTGCAATACTTGCAATGAGTTTCATGATTCTTGGATTAACTTTAATTGCAAGGAAAAGCAAACCTCGAAATTCTGGGAAAGAAGTCATGGATATTCCAACGTTTGATTTGTCAGTCATAACTAAGGCTACTGATAATTTTTCTACTATTAACAAATTGGGTGAAGGTGGTTTTGGGCCAGTATACAAGGGTACTTTAGAAGATGGACAAGAGTTAGCTGTGAAAAGGTTGTCAGCAAAATCAGGTCAAGGAATGGAAGAGTTGAAAAATGAAATTGTGCTGATAGCAAAACTTCAACATCGTAATCTTGTGAAGCTTCTTGGTTGTTGCATTGTAGGGGACGAGAAGTTGTTGATTTATGAATATATGTCAAATAAGAGCTTGGACTACTTTATTTTTGATGTAACTCGTAGCAACCTGTTGGATTGGCCTAAGCGTTGGCATATTATTCATGGCATTGCTCGAGGACTTCTCTATCTTCATATGGATTCTAGATTGAGAATAATTCATAGAGATCTTAAAACCAGCAATATTTTGCTAGATGCTTACATGAATCCAAAAATATCAGATTTTGGTCTAGCTCGTACATTTTGGGATGATCAGGTTGATGCGAACACTAACAAAATTGTCGGAACATATGGATATATGCCTCCTGAATATGTTTTGCATGGATGTTTTTCAATGAAATCCGATGTCTTTAGCTTTGGTGTAATAGTGCTAGAAATTGTTATTGGGAAGAAGAACCGGGGATTTTTAGACCAAGAATACGGCCTTAATCTTCTTGGACATGCATGGAGATTGTGGATCCAAGGAAGAGCAATGGAACTGTTGGATGAATGTTTAAGGGAAAGTTACAATGAATATGAAGTCCTAAGATGCGTACAAGTAGGACTATTGTGTGTTCAACAGAAAGTTGAAGATAGGCCTGATATGTCAACTGTGATTCTAATGTTAAATGGTGAAAAGTTATTGCCACAACCAAAAGTTCCTTGTTTCTACACTGCTGGTGATGTCTTTGCTGATCCAAGCCACAGAATGTCTCAAAATGAAATTTCTCAAACCATGCTAGAGGGAAGATGA 2424 0.4047 MMASFRVLYLYFLLLCFVESLTSRDTITEGNFIRDGETLVSSNRFFELGFFSPGSSTLRYLGIWYRESPSTVFWVANRNTSINNVNGKGLLRLNDQGVLLLLDAKNNTMWSSDNSSTTTRIKAYNPFAQLLDSGNLVVKNDAFDRLWQSFDYPCDTLMPGMKLGWDQETGLDKVLSSWKSSYDPGQGDYIYKIDRKGYPQLFALRSSKVMFRPGSWNGITLTWLPNHNPNPIFTTEFVVNEKEVYFTSELRNNSIFSRFAVNPSGIGQRFDWVIQTSSWQLLSTGSIDQCENYALCGANSICNISNNPVCECLRGYEPKNFKEWNVSNWNSGCTRRVSLDCGGGDGFKQYTSIKLPDTSSSWYNTTMNLKECKKTCLQNCSCAAYSNLDIRGEGSGCLVWFDHLLDMRQFPAGGQDLYVRLPASELDHFRDEGRGSIGKKKLAGIVVGCAILAMSFMILGLTLIARKSKPRNSGKEVMDIPTFDLSVITKATDNFSTINKLGEGGFGPVYKGTLEDGQELAVKRLSAKSGQGMEELKNEIVLIAKLQHRNLVKLLGCCIVGDEKLLIYEYMSNKSLDYFIFDVTRSNLLDWPKRWHIIHGIARGLLYLHMDSRLRIIHRDLKTSNILLDAYMNPKISDFGLARTFWDDQVDANTNKIVGTYGYMPPEYVLHGCFSMKSDVFSFGVIVLEIVIGKKNRGFLDQEYGLNLLGHAWRLWIQGRAMELLDECLRESYNEYEVLRCVQVGLLCVQQKVEDRPDMSTVILMLNGEKLLPQPKVPCFYTAGDVFADPSHRMSQNEISQTMLEGR 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01529 807 Gene3D Phosphorylase Kinase; domain 1 462 570 - -
Accr13g01529 807 Pfam Protein tyrosine and serine/threonine kinase 497 763 IPR001245 GO:0004672|GO:0006468
Accr13g01529 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 571 774 - -
Accr13g01529 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 340 421 - -
Accr13g01529 807 SMART serkin_6 495 742 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01529 807 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 12 757 - -
Accr13g01529 807 ProSitePatterns Serine/Threonine protein kinases active-site signature. 616 628 IPR008271 GO:0004672|GO:0006468
Accr13g01529 807 Pfam PAN-like domain 341 407 IPR003609 -
Accr13g01529 807 SUPERFAMILY Protein kinase-like (PK-like) 478 778 IPR011009 -
Accr13g01529 807 Gene3D Hepatocyte Growth Factor 338 418 - -
Accr13g01529 807 Pfam S-locus glycoprotein domain 211 320 IPR000858 GO:0048544
Accr13g01529 807 ProSiteProfiles PAN/Apple domain profile. 341 422 IPR003609 -
Accr13g01529 807 SUPERFAMILY alpha-D-mannose-specific plant lectins 72 184 IPR036426 -
Accr13g01529 807 CDD PAN_AP_plant 337 422 - -
Accr13g01529 807 CDD B_lectin 31 153 IPR001480 -
Accr13g01529 807 Pfam D-mannose binding lectin 71 179 IPR001480 -
Accr13g01529 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 150 - -
Accr13g01529 807 SMART blect_4 30 153 IPR001480 -
Accr13g01529 807 SMART ntp_6 342 421 IPR003609 -
Accr13g01529 807 ProSiteProfiles EGF-like domain profile. 286 322 IPR000742 -
Accr13g01529 807 Gene3D Transferase(Phosphotransferase) domain 1 571 773 - -
Accr13g01529 807 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 462 570 - -
Accr13g01529 807 Gene3D - 19 150 IPR036426 -
Accr13g01529 807 ProSiteProfiles Protein kinase domain profile. 495 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01529 807 ProSiteProfiles Bulb-type lectin domain profile. 24 151 IPR001480 -
Accr13g01529 807 CDD STKc_IRAK 501 768 - -
Accr13g01529 807 PIRSF SRK 1 807 IPR024171 GO:0004674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01529 Accr-Chr13 24619547 24622837 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01529 423 781 Receptor kinase-like Gene Family AT4G23190 51.762 9.92e-122 377
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01529 PK_Tyr_Ser-Thr 2.7e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01529 - - gmx:100790261 952.584