Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01526 ATGGAGTTTGGCTATAAACTTTTCCTTCATTTTGTATTTGGCTACCTCACTTTCAACGCTCTCACGGATTATCGATCCATTAATGCTCAACTCATACCAGAAGATGAAGTGAGAGTTCTTAAAGCAATATCATCGAAGATAGAGAACATGAATTGGAATGTAACTCAACGTGCTTGTGTTGATGGAGGCTTCACAAATAGTGGCACCAAAAGGAACGTAACGTGCAATTGCACTTTCTCAAGCGGAAAAGTTTGCCATGTTACAAATATTCAAATGACGGGTGTTAATCTATCAGGATCTATACCAAGTGAATTTGGGTTCCTTATCCATCTGCAGCGACTTGATTTGACGCGCAATTATCTAAATGGATCAATCCCAACGAGCTTAGCTAGACTCCCTCTTGTTTCTTTACACCTTTCAGGTAACCCAATTAGTGGTTCAATTCCAAACGAAATTGGTGAAATTACAACTTTGAAAGAGCTACATTTGAAAGACAATCTATTAGAAGGAACTCTTCCCTCTAGTCTCGGAAAATTGAAACAGTTACGCGTATTGCTTCTTTCTGGAAATAATTTCTCAGGGAAAATACCCGAAAGTTTTGGTAACCTGAAAAAACTAGGAATTATTTCATTAGATGGGAACAATATAACAGGAAAGTTTCCCAGTTTTATTGGGAATTGGACCTACCTTTATAGACTGTACCTACAAGGAACGTCTTTGCAAGGCCCCATTCCTTCAGTTATATCTCAATTAACAAATTTGACTCAATTGTTCATATCTGATTTGCGCGGACCAGCGACAATGAGATTTCCTAATCTCGAGAATTTGACATCTTTGAATATATTGGTGTTGAGAAATTGTTGCATCCATGATTCTATCCCTAATCATGTTGGTAAAATGGAAAACTTATCTGCTCTAGATTTGAGCTTCAACAAGTTGATCGGTGAAATCCCAAACAATATAAGTCACTTGACGAACCTAAAATACATGTTTCTGACTGAAAATTCTCTGAGTGGGAAAATTCCTGGATGGATACTGCAAAACAAAGATGATTATTTTGATCTATCTTACAACAATTTTTCGGAGACTTCTGTCACTACTTGTCAGTACAATAATGTAAACTTGGCTTCCAGCTTGTCGTCTTCAGCAAACACATCACGTAATTGTCTGAAAAGGGGCCTTCCTTGTGGAGGAAAACCCAAATATTATTCATTGTTCATAAATTGTGGAGGACCAGAAATTGAGTATGAGGGGAATAAATACGAAGAAGACACTAATCCTGGGAGTATCTCATTCTTTTTTCTCAGTGATGATAAATGGGCTTATAGCAACACAGGAGTAGTATACTTCAGAAACTATGATAATAATTACCTAGCTACAAACAAATATTCTCTGAATATTAGTGGCCCAGGATTCTACCAAACTGCTCGCTTTTCTCCTTTATCTCTCAAGTATCATGGCCTTTGTATGATTAATGGAAATTACAACGTCAAGCTACACTTTGCAGAGATTATGTATTCTCATGATCAAAATTTCAGTAGCCTTGGAAGCCGCATATTTGATGTTTCAATTCAAGGTAGGCAATATTTGAGTGATTTCAACATTATGAAGGAAGCTGATGGCGTTGGAAAGGGCATAGTTAAGGACTTTAATGTTGATGTTAATGATAACACATTGGAGATTCATTTATATTGGGCTAGTGGGAAAGGAACTACGTATGTTCCTGATTATGGTGCATACGGACCTCTTATATCTGCCATTTCAGTTACCCCAAACTTCAAAATTCCTTCAGAAAGGCTTTCTGCTGTAGCCATTGTTGGAATTGTGGTTGGATCATGTGTGTTCCTCATACTAATAGTATTTGTCCTTAGAAAGATGGGTTTCCTAGGTGGCAAAGGTGCAAAACCCAAAGAACTTTTAGATCTTAAAACGGGTTATTTCTCTTTAAAACAAATCAAAGACGCGACTAATAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGTACAAGGGTGTACTATCAGATGGTGTTGTTATAGCTGTGAAGCAGCTTTCGTCCAAATCAAAACAAGGAAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGAAACACTCAAACCTTGTAAAGCTTTATGGCTGTTGCGTTGAAGGAAACCAGTTGTTGCTAATATATGAGTATATGGAGAACAACAGTCTTGCTAGTGCTCTTTTTGGTGGCCAAGAACGAAAGATACAATTGGACTGGGCTACAAGAATGAATATTTGTGTAGGGATAGTAAGAGGATTAGCTTATCTTCATGAGGAATCAAGATTGAAAATTGTGCATAGGGATATTAAGGCAACAAATGTCTTGCTTGATAAAGGTTTGAATGCCAAGATCTCAGACTTTGGCTTGGCCAAACTTGGTGAAGATGAGAATACTCATATAAGCACAAGAATAGCGGGAACCATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATACTTGACTCCCAAAGCAGATATTTATAGTTTTGGAGTTGTTGCTCTAGAAATTGTTAGTGGAAAAAGCAACACAAGTTACAGACCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGCATATGTTCTTCAAGAGCAACGAAACCTTCTTGATCTGGTGGATCCAAGTCTTGGTTCAAGCTACTCCGTACAGGAAGCCATGAGAATGCTGGAGGTGGCACTCCTATGCACTAACCCATCTCCAACTCTGAGACCATCCATGTCCTCTGTTGCTTGCATGCTTGAAGGAAAGTTGCCGATCCATGCACCAATAATCAAATCCCGGGAGAGTGACAAGGATGCCAGATTCAAGGCATCTGAGGTATTATCATCACAAGATAGCCATAGCCAAACTTTTAATTCTTTTACAATATCACAAGAAAATGTGGAGCAAAGATTTGAAGTGGATGGTCCATCGACTAATTCCTTTATTTCCCTTCCAAGTGAATTTTTCTCTTCATCTAGTAGGCTTCTGAAGGATTCCGACTAG 3036 0.3821 MEFGYKLFLHFVFGYLTFNALTDYRSINAQLIPEDEVRVLKAISSKIENMNWNVTQRACVDGGFTNSGTKRNVTCNCTFSSGKVCHVTNIQMTGVNLSGSIPSEFGFLIHLQRLDLTRNYLNGSIPTSLARLPLVSLHLSGNPISGSIPNEIGEITTLKELHLKDNLLEGTLPSSLGKLKQLRVLLLSGNNFSGKIPESFGNLKKLGIISLDGNNITGKFPSFIGNWTYLYRLYLQGTSLQGPIPSVISQLTNLTQLFISDLRGPATMRFPNLENLTSLNILVLRNCCIHDSIPNHVGKMENLSALDLSFNKLIGEIPNNISHLTNLKYMFLTENSLSGKIPGWILQNKDDYFDLSYNNFSETSVTTCQYNNVNLASSLSSSANTSRNCLKRGLPCGGKPKYYSLFINCGGPEIEYEGNKYEEDTNPGSISFFFLSDDKWAYSNTGVVYFRNYDNNYLATNKYSLNISGPGFYQTARFSPLSLKYHGLCMINGNYNVKLHFAEIMYSHDQNFSSLGSRIFDVSIQGRQYLSDFNIMKEADGVGKGIVKDFNVDVNDNTLEIHLYWASGKGTTYVPDYGAYGPLISAISVTPNFKIPSERLSAVAIVGIVVGSCVFLILIVFVLRKMGFLGGKGAKPKELLDLKTGYFSLKQIKDATNNFAPENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALKHSNLVKLYGCCVEGNQLLLIYEYMENNSLASALFGGQERKIQLDWATRMNICVGIVRGLAYLHEESRLKIVHRDIKATNVLLDKGLNAKISDFGLAKLGEDENTHISTRIAGTIGYMAPEYAMRGYLTPKADIYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQRNLLDLVDPSLGSSYSVQEAMRMLEVALLCTNPSPTLRPSMSSVACMLEGKLPIHAPIIKSRESDKDARFKASEVLSSQDSHSQTFNSFTISQENVEQRFEVDGPSTNSFISLPSEFFSSSSRLLKDSD 1011
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01526 1011 FunFam Putative LRR receptor-like serine/threonine-protein kinase 735 942 - -
Accr13g01526 1011 Pfam Malectin domain 404 587 IPR021720 -
Accr13g01526 1011 Gene3D Phosphorylase Kinase; domain 1 631 734 - -
Accr13g01526 1011 SUPERFAMILY Protein kinase-like (PK-like) 644 931 IPR011009 -
Accr13g01526 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 781 793 IPR008271 GO:0004672|GO:0006468
Accr13g01526 1011 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 632 734 - -
Accr13g01526 1011 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 963 - -
Accr13g01526 1011 Gene3D Transferase(Phosphotransferase) domain 1 735 954 - -
Accr13g01526 1011 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 402 592 - -
Accr13g01526 1011 Gene3D Ribonuclease Inhibitor 198 263 IPR032675 -
Accr13g01526 1011 SMART serkin_6 659 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01526 1011 FunFam Leucine-rich repeat receptor protein kinase EMS1 101 198 - -
Accr13g01526 1011 Gene3D - 402 592 - -
Accr13g01526 1011 CDD STKc_IRAK 665 932 - -
Accr13g01526 1011 Pfam Protein kinase domain 662 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01526 1011 Pfam Leucine Rich Repeat 302 324 IPR001611 GO:0005515
Accr13g01526 1011 ProSiteProfiles Protein kinase domain profile. 659 940 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01526 1011 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
Accr13g01526 1011 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 270 363 - -
Accr13g01526 1011 SUPERFAMILY RNI-like 90 363 - -
Accr13g01526 1011 Gene3D Ribonuclease Inhibitor 265 380 IPR032675 -
Accr13g01526 1011 Gene3D Ribonuclease Inhibitor 36 197 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01526 Accr-Chr13 24453094 24464288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01526 28 998 Receptor kinase-like Gene Family AT1G53440 57.071 0.0 1092
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01526 Pkinase 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01526 - - qsa:O6P43_001071 1258.43