Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01525 ATGGAGTTTGGCTATAAACTTTTCCTTCATTTTGTATTTGGCTACCTCACTTTCAACGCTCTCACGGATTATCGATCCATTAATGCTCAACTCATACCAGAAGATGAAGTGAGAGTTCTTAAAGCAATATCATCGAAGATAGAGAACATGAATTGGAATGTAACTCAACGTGCTTGTGTTGATGGAGGCTTCACAAATAGTGGCACCAAAAGGAACGTAACGTGCAATTGCACTTTCTCAAGCGGAAAAGTTTGCCATGTTACAAATATTCAAATGACGGGTGTTAATCTATCAGGATCTATACCAAGTGAATTTGGGTTCCTTATCCATCTGCAGCGACTTGATTTGACGCGCAATTATCTAAATGGATCAATCCCAACGAGCTTAGCTAGACTCCCTCTTGTTTCTTTACACCTTTCAGGTAACCCAATTAGTGGTTCAATTCCAAACGAAATTGGTGAAATTACAACTTTGAAAGAGCTACATTTGAAAGACAATCTATTAGAAGGAACTCTTCCCTCTAGTCTCGGAAAATTGAAACAGTTACGCGTATTGCTTCTTTCTGGAAATAATTTCTCAGGGAAAATACCCGAAAGTTTTGGTAACCTGAAAAAACTAGGAATTATTTCATTAGATGGGAACAATATAACAGGAAAGTTTCCCAGTTTTATTGGGAATTGGACCTACCTTTATAGACTGTACCTACAAGGAACGTCTTTGCAAGGCCCCATTCCTTCAGTTATATCTCAATTAACAAATTTGACTCAATTGTTCATATCTGATTTGCGCGGACCAGCGACAATGAGATTTCCTAATCTCGAGAATTTGACATCTTTGAATATATTGGTGTTGAGAAATTGTTGCATCCATGATTCTATCCCTAATCATGTTGGTAAAATGGAAAACTTATCTGCTCTAGATTTGAGCTTCAACAAGTTGATCGGTGAAATCCCAAACAATATAAGTCACTTGACGAACCTAAAATACATGTTTCTGACTGAAAATTCTCTGAGTGGGAAAATTCCTGGATGGATACTGCAAAACAAAGATGATTATTTAAACTTGGCTTCCAGCTTGTCGTCTTCAGCAAACACATCACGTAATTGTCTGAAAAGGGGCCTTCCTTGTGGAGGAAAACCCAAATATTATTCATTGTTCATAAATTGTGGAGGACCAGAAATTGAGTATGAGGGGAATAAATACGAAGAAGACACTAATCCTGGGAGTATCTCATTCTTTTTTCTCAGTGATGATAAATGGGCTTATAGCAACACAGGAGTAGTATACTTCAGAAACTATGATAATAATTACCTAGCTACAAACAAATATTCTCTGAATATTAGTGGCCCAGGATTCTACCAAACTGCTCGCTTTTCTCCTTTATCTCTCAAGTATCATGGCCTTTGTATGATTAATGGAAATTACAACGTCAAGCTACACTTTGCAGAGATTATGTATTCTCATGATCAAAATTTCAGTAGCCTTGGAAGCCGCATATTTGATGTTTCAATTCAAGGTAGGCAATATTTGAGTGATTTCAACATTATGAAGGAAGCTGATGGCGTTGGAAAGGGCATAGTTAAGGACTTTAATGTTGATGTTAATGATAACACATTGGAGATTCATTTATATTGGGCTAGTGGGAAAGGAACTACGTATGTTCCTGATTATGGTGCATACGGACCTCTTATATCTGCCATTTCAGTTACCCCAAACTTCAAAATTCCTTCAGAAAGGCTTTCTGCTGTAGCCATTGTTGGAATTGTGGTTGGATCATGTGTGTTCCTCATACTAATAGTATTTGTCCTTAGAAAGATGGGTTTCCTAGGTGGCAAAGGTGCAAAACCCAAAGAACTTTTAGATCTTAAAACGGGTTATTTCTCTTTAAAACAAATCAAAGACGCGACTAATAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTGTACAAGGGTGTACTATCAGATGGTGTTGTTATAGCTGTGAAGCAGCTTTCGTCCAAATCAAAACAAGGAAATCGTGAATTTGTTAATGAAATTGGAATGATATCTGCTTTGAAACACTCAAACCTTGTAAAGCTTTATGGCTGTTGCGTTGAAGGAAACCAGTTGTTGCTAATATATGAGTATATGGAGAACAACAGTCTTGCTAGTGCTCTTTTTGGTGGCCAAGAACGAAAGATACAATTGGACTGGGCTACAAGAATGAATATTTGTGTAGGGATAGTAAGAGGATTAGCTTATCTTCATGAGGAATCAAGATTGAAAATTGTGCATAGGGATATTAAGGCAACAAATGTCTTGCTTGATAAAGGTTTGAATGCCAAGATCTCAGACTTTGGCTTGGCCAAACTTGGTGAAGATGAGAATACTCATATAAGCACAAGAATAGCGGGAACCATTGGTTATATGGCTCCTGAATATGCAATGCGAGGATACTTGACTCCCAAAGCAGATATTTATAGTTTTGGAGTTGTTGCTCTAGAAATTGTTAGTGGAAAAAGCAACACAAGTTACAGACCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGCATATGTTCTTCAAGAGCAACGAAACCTTCTTGATCTGGTGGATCCAAGTCTTGGTTCAAGCTACTCCGTACAGGAAGCCATGAGAATGCTGGAGGTGGCACTCCTATGCACTAACCCATCTCCAACTCTGAGACCATCCATGTCCTCTGTTGCTTGCATGCTTGAAGGAAAGTTGCCGATCCATGCACCAATAATCAAATCCCGGGAGAGTGACAAGGATGCCAGATTCAAGGCATCTGAGGTATTATCATCACAAGATAGCCATAGCCAAACTTTTAATTCTTTTACAATATCACAAGAAAATGTGGAGCAAAGATTTGAAGTGGATGGTCCATCGACTAATTCCTTTATTTCCCTTCCAAGTGAATTTTTCTCTTCATCTAGTAGGCTTCTGAAGGATTCCGACTAG 2976 0.3831 MEFGYKLFLHFVFGYLTFNALTDYRSINAQLIPEDEVRVLKAISSKIENMNWNVTQRACVDGGFTNSGTKRNVTCNCTFSSGKVCHVTNIQMTGVNLSGSIPSEFGFLIHLQRLDLTRNYLNGSIPTSLARLPLVSLHLSGNPISGSIPNEIGEITTLKELHLKDNLLEGTLPSSLGKLKQLRVLLLSGNNFSGKIPESFGNLKKLGIISLDGNNITGKFPSFIGNWTYLYRLYLQGTSLQGPIPSVISQLTNLTQLFISDLRGPATMRFPNLENLTSLNILVLRNCCIHDSIPNHVGKMENLSALDLSFNKLIGEIPNNISHLTNLKYMFLTENSLSGKIPGWILQNKDDYLNLASSLSSSANTSRNCLKRGLPCGGKPKYYSLFINCGGPEIEYEGNKYEEDTNPGSISFFFLSDDKWAYSNTGVVYFRNYDNNYLATNKYSLNISGPGFYQTARFSPLSLKYHGLCMINGNYNVKLHFAEIMYSHDQNFSSLGSRIFDVSIQGRQYLSDFNIMKEADGVGKGIVKDFNVDVNDNTLEIHLYWASGKGTTYVPDYGAYGPLISAISVTPNFKIPSERLSAVAIVGIVVGSCVFLILIVFVLRKMGFLGGKGAKPKELLDLKTGYFSLKQIKDATNNFAPENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALKHSNLVKLYGCCVEGNQLLLIYEYMENNSLASALFGGQERKIQLDWATRMNICVGIVRGLAYLHEESRLKIVHRDIKATNVLLDKGLNAKISDFGLAKLGEDENTHISTRIAGTIGYMAPEYAMRGYLTPKADIYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQRNLLDLVDPSLGSSYSVQEAMRMLEVALLCTNPSPTLRPSMSSVACMLEGKLPIHAPIIKSRESDKDARFKASEVLSSQDSHSQTFNSFTISQENVEQRFEVDGPSTNSFISLPSEFFSSSSRLLKDSD 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01525 991 SUPERFAMILY L domain-like 80 348 - -
Accr13g01525 991 Gene3D Transferase(Phosphotransferase) domain 1 715 946 - -
Accr13g01525 991 ProSiteProfiles Protein kinase domain profile. 639 920 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01525 991 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 382 572 - -
Accr13g01525 991 Gene3D Ribonuclease Inhibitor 36 194 IPR032675 -
Accr13g01525 991 ProSitePatterns Serine/Threonine protein kinases active-site signature. 761 773 IPR008271 GO:0004672|GO:0006468
Accr13g01525 991 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 943 - -
Accr13g01525 991 SMART serkin_6 639 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01525 991 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 270 361 - -
Accr13g01525 991 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 612 714 - -
Accr13g01525 991 Gene3D Phosphorylase Kinase; domain 1 611 714 - -
Accr13g01525 991 Pfam Leucine Rich Repeat 302 324 IPR001611 GO:0005515
Accr13g01525 991 Pfam Protein kinase domain 642 905 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01525 991 FunFam Leucine-rich repeat receptor protein kinase EMS1 101 196 - -
Accr13g01525 991 Gene3D Ribonuclease Inhibitor 265 378 IPR032675 -
Accr13g01525 991 FunFam Putative LRR receptor-like serine/threonine-protein kinase 715 922 - -
Accr13g01525 991 Gene3D Ribonuclease Inhibitor 195 263 IPR032675 -
Accr13g01525 991 SUPERFAMILY Protein kinase-like (PK-like) 624 911 IPR011009 -
Accr13g01525 991 Pfam Malectin domain 384 567 IPR021720 -
Accr13g01525 991 CDD STKc_IRAK 645 912 - -
Accr13g01525 991 Gene3D - 382 572 - -
Accr13g01525 991 Pfam Leucine rich repeat 157 216 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01525 Accr-Chr13 24453094 24464288 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01525 28 978 Receptor kinase-like Gene Family AT1G53440 56.218 0.0 1066
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01525 Pkinase 1.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01525 - - adu:107459475 1233.39