Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01509 ATGGCGACGGAGCTCATGCAAGCGATTCAGTACGACAGCTACGGCGGTGGCCCCGCCGGTCTGAAGCATGTTGAGATTCCAGTTCCCACCGCAAATAAAAATGAGGTTTTGCTGAAAGTGGAAGCAGCTAGTCTGAACCCTTTTGATTGGAAGATTCAAGAGGGCGTAGCACGGCCTCTATTACCACGAAAGTTTCCCTATATACCTGGCACTGATATAGCAGGAGAGATAGTAAAGGTTGGACCACAAGTCAAAGATTTCAAAGTTGGTGACAAAGTTGTTGCTTTTCATCCTCATGATCGTGGAGGTGGACTAGCTGAGTTTGCTGTGGCTTCTGAGGACTTAACAGTTTCGAGACCACCTGAAGTCTCAGCGGCTGAAGCTGCAGCTTTAACGCTGGCTGGTCTAACAGCTCATCAGCCGCTCACTGAAATTGCCGGAGTCAAGCTTGATGGAACTGGTGAACAAAAGAACATCCTAGTAACTGCAGCCTCAGGTGGCGTTGGTCACCTTGCAGTACAGCTCGCAAAGCTTGGGAACACTTTTGTAACGGCCACTTGTGGGGCCCGCAACATTGACTTTGTCAGTAGCCTAGGCGCTGACGAGGTTCTTGACTATAAGACTCCAGAAGGAGCTGCTTTGAAGAGTCCATCTGGTCGAAAATATGATGCAGTGATACATTGTGCGACTGGGATACCGTGGTCCACTTTTGAGCCTCAATTGAGTGATCATGGAAAGGTGATAGACTTGACGCCAGGCTTGAGCTCATTCGCGACTTTTGCTCTGAAGAAGCTCACATTCTCTAAGAAGCAGCTGGTGCCGTTCTTTGCAACACCCAAGAAAGAGAACCTGAGTTATCTGGTTCAGTTGGTTAAAGATGGAAGGCTTAAAACTGTTATTGACTCTCGTTTTCCTTTGAGTCAAGCTGAAGATGCTTGGGCTAAGAGCATAGATGGCCATGCCACTGGAAAAATCATTGTGGAGCCTTAA 990 0.4798 MATELMQAIQYDSYGGGPAGLKHVEIPVPTANKNEVLLKVEAASLNPFDWKIQEGVARPLLPRKFPYIPGTDIAGEIVKVGPQVKDFKVGDKVVAFHPHDRGGGLAEFAVASEDLTVSRPPEVSAAEAAALTLAGLTAHQPLTEIAGVKLDGTGEQKNILVTAASGGVGHLAVQLAKLGNTFVTATCGARNIDFVSSLGADEVLDYKTPEGAALKSPSGRKYDAVIHCATGIPWSTFEPQLSDHGKVIDLTPGLSSFATFALKKLTFSKKQLVPFFATPKKENLSYLVQLVKDGRLKTVIDSRFPLSQAEDAWAKSIDGHATGKIIVEP 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01509 329 Gene3D - 142 280 - -
Accr13g01509 329 SMART PKS_ER_names_mod 16 327 IPR020843 GO:0016491
Accr13g01509 329 Pfam Alcohol dehydrogenase GroES-like domain 34 95 IPR013154 -
Accr13g01509 329 Pfam Zinc-binding dehydrogenase 198 327 - -
Accr13g01509 329 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 123 274 IPR036291 -
Accr13g01509 329 Gene3D - 13 327 - -
Accr13g01509 329 SUPERFAMILY GroES-like 5 147 IPR011032 -
Accr13g01509 329 PANTHER ZINC-TYPE ALCOHOL DEHYDROGENASE-LIKE PROTEIN C16A3.02C 4 328 - -
Accr13g01509 329 CDD MDR1 9 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01509 Accr-Chr13 24038598 24042088 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01509 65 210 Monolignol Biosynthesis Gene Families AT4G37980 27.222 7.96e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01509 K00224 - cpap:110821718 518.85