Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01455 ATGGCTTCCGTAGCAGCCACACAGGTTCTACTACGCAACGTCCTCTCACGAAATCACCGGTCAACCAGATTCTCTTCACTCCAAAGCTCCACTTCCAGATCTCTACTTCTTCGAGTTCGAGCCTCGCAGACTTCGGAGGAGCCTCGCGAACGCCAAAAAGCACCCCCTGGAGTTGACACCAGAATCCATTGGGACAACGAAGATGAGGGTTGGATCGGAGGCACTACTAGTAATAGTAAACAATCCAAACCAGAGGATGTGCTCGGCCAAAATTTTGCTGATTTGCTTTCTGATTTTTCTGGCTCTCATTACGAATTTTTAGGAGTTTCCGCAGAAGCTGATTTAGAAGAAATTAAAGCAGCTTACAGGAGATTATCAAAGGAATACCATCCAGACACAACCTCACTCCCTCTAAAAACTGCCTCAGACAAATTCATGAAGTTGAGAGAAGTGTACAATGTCCTGAGCAGTGAAGAGAGCAGAAAATTTTATGACTGGACGCTTCTTCAGGAGGCAGCGAGCCGGCAATCGGAGAAGATGAAGATGAGATTGGAGGATCCTCATGAGTTAGATGCGAAGAACTGGGAATCTGTTCCAGACGTGGTTGATCGGCTTGGAGGAAGGAACATGAAGCTCAGTGATCAAGCAGTCACTGCTCTCACTGTTGATGTTTTCATCATTATTTTTTCTATTTGCTGCATCATTTATGTAATATACTTCAAAGAGCCATATTAG 735 0.449 MASVAATQVLLRNVLSRNHRSTRFSSLQSSTSRSLLLRVRASQTSEEPRERQKAPPGVDTRIHWDNEDEGWIGGTTSNSKQSKPEDVLGQNFADLLSDFSGSHYEFLGVSAEADLEEIKAAYRRLSKEYHPDTTSLPLKTASDKFMKLREVYNVLSSEESRKFYDWTLLQEAASRQSEKMKMRLEDPHELDAKNWESVPDVVDRLGGRNMKLSDQAVTALTVDVFIIIFSICCIIYVIYFKEPY 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01455 244 CDD DnaJ 103 156 IPR001623 -
Accr13g01455 244 ProSiteProfiles dnaJ domain profile. 102 168 IPR001623 -
Accr13g01455 244 MobiDBLite consensus disorder prediction 43 64 - -
Accr13g01455 244 FunFam DnaJ homolog subfamily C member 4 91 189 - -
Accr13g01455 244 Gene3D DnaJ domain 95 188 IPR036869 -
Accr13g01455 244 PANTHER NAD(P)H-QUINONE OXIDOREDUCTASE SUBUNIT T, CHLOROPLASTIC 1 244 IPR044618 -
Accr13g01455 244 MobiDBLite consensus disorder prediction 39 64 - -
Accr13g01455 244 Coils Coil 108 128 - -
Accr13g01455 244 PRINTS DnaJ domain signature 122 137 IPR001623 -
Accr13g01455 244 PRINTS DnaJ domain signature 140 160 IPR001623 -
Accr13g01455 244 PRINTS DnaJ domain signature 104 122 IPR001623 -
Accr13g01455 244 SMART dnaj_3 101 160 IPR001623 -
Accr13g01455 244 SUPERFAMILY Chaperone J-domain 102 169 IPR036869 -
Accr13g01455 244 Pfam DnaJ domain 103 165 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01455 Accr-Chr13 22238220 22240884 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01455 103 165 C2H2 Transcription Factor Family AT1G74250 40.299 4.38e-08 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01455 K23051 - qsa:O6P43_001846 317.775