Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01428 ATGCCTACATCCGTTCTTGATGGTCAGTCTGGAGACAAATTGCTTCGGAAGCCATTTGCAATTCGTGATTACCCGCCTGGGGTTGGACCAAATGCTGCAAGAATCCATGTTAAACCTAAAGAAGATACTGCTAAGGGTGGTGAGGCTAATCTTCAACACTCTGCCTCTAGAAGATTTGTTTCTGCTATTAGAGACTATCCTCCTTTTTGTGGACGTAATTCTCGGGGACTGAGTAAGGCAGATGTTTCCAAGCTCATGCAGAGGCGTTTGGCTGGTGTTAGGGAAGAAAGGAAGAGAAAACTTGATTGCCTCACACGGGGTGATTTATCTAAAGCTGTGATGAGGACTGAAGACTCTCTGAATCATTCCAACATGAAGGTTTTAAAAAAGAAAGAAGGAAATGCTGCTTCTGGAGCTATGGCTAAACTTGTAGTCATAGGAAAAAATGGTCATGATACCAATTATAGAAGAAAATTTTCTGATGGCCACAGATCATATGGTGTAAATGTTCCACTTCTGCATCATCGTAATTTGAGCATTCACAACAGTAACTCAATTGTTCCACGAATTACTGTAAGAGACACACTGCGCTCTTTCCAAGCGCTTTGTAGAAAATTGTTGAAAGAAGTAGAAGCACAGTCAAAAGGCCAAGCAAAAATTTGGAAGAGGATTGACTTAGAGGCAGCAAACATCCTTAAGAAGGAAGGAAAATATATTAATGAAGGCAAGATCTTTGGTTCTGTTCCTGGGGTTGAAATAGGTGATGAGTTTGACTATAGAGTGGAGCTTAATTTAGTTGGTCTTCATCACAATATACAGGCTGGCATAGATTATGCAACGCGCAATGGTGAGCATCTTGCAACTAGTATTGTTGCATCAGGGGGATACAATGATGAGTTGGATAGTTCAGGTGTTTTGATTTATTCAGGGCACGGGGGGAATGTGATGTCCAAAAAGAAAGAACCTGAAGACCAGAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTAGCAAGAAAAAGAATCCTGTTAGAGTGATACGCGGTGCTTTCTTTGGAGGTGGAAGTCGTAGGACATTTGTGTATGATGGACTGTATGAAGTTGAGTCATACTGGCAAGAAAGGGGGCCACATGGCAAGATGGTTTTCAAGTTTCAGCTACGAAGAATCCCAAATCAACCCGAGCTTCCTTGGCTTACGTGA 1203 0.4206 MPTSVLDGQSGDKLLRKPFAIRDYPPGVGPNAARIHVKPKEDTAKGGEANLQHSASRRFVSAIRDYPPFCGRNSRGLSKADVSKLMQRRLAGVREERKRKLDCLTRGDLSKAVMRTEDSLNHSNMKVLKKKEGNAASGAMAKLVVIGKNGHDTNYRRKFSDGHRSYGVNVPLLHHRNLSIHNSNSIVPRITVRDTLRSFQALCRKLLKEVEAQSKGQAKIWKRIDLEAANILKKEGKYINEGKIFGSVPGVEIGDEFDYRVELNLVGLHHNIQAGIDYATRNGEHLATSIVASGGYNDELDSSGVLIYSGHGGNVMSKKKEPEDQKLERGNLALKNSSKKKNPVRVIRGAFFGGGSRRTFVYDGLYEVESYWQERGPHGKMVFKFQLRRIPNQPELPWLT 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01428 400 Gene3D - 227 400 IPR036987 -
Accr13g01428 400 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 118 395 - -
Accr13g01428 400 ProSiteProfiles YDG domain profile. 246 389 IPR003105 -
Accr13g01428 400 Pfam SAD/SRA domain 245 393 IPR003105 -
Accr13g01428 400 SMART G9a_1 241 393 IPR003105 -
Accr13g01428 400 SUPERFAMILY PUA domain-like 228 398 IPR015947 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01428 Accr-Chr13 21840754 21841956 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01428 189 394 Su(var)3-9 homologs AT5G04940 44.286 6.83e-43 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01428 K11420 - tpra:123908193 314.309