Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01427 ATGCCTACATCCGTTCTTGATGGTCAGTCTGGAGACAAATTGCTTCGGAAGCCATTTGCAATTCGTGATTACCCGCCTGGGGTTGGACCAAATGCTGCAAGAATCCATGTTAAACCTAAAGAAGATACTGCTAAGGGTGGTGAGGCTAATCTTCAACACTCTGCCTCTAGAAGATTTGTTTCTGCTATTAGAGACTATCCTCCTTTTTGTGGACGTAATTCTCGGGGACTGAGTAAGGCAGATGTTTCCAAGCTCATGCAGAGGCGTTTGGCTGGTGTTAGGGAAGAAAGGAAGAGAAAACTTGATTGCCTCACACGGGGTGATTTATCTAAAGCTGTGATGAGGACTGAAGACTCTCTGAATCATTCCAACATGAAGGTTTTAAAAAAGAAAGAAGGAAATGCTGCTTCTGGAGCTATGGCTAAACTTGTAGTCATAGGAAAAAATGGTCATGATACCAATTATAGAAGAAAATTTTCTGATGGCCACAGATCATATGGTGTAAATGTTCCACTTCTGCATCATCGTAATTTGAGCATTCACAACAGTAACTCAATTGTTCCACGAATTACTGTAAGAGACACACTGCGCTCTTTCCAAGCGCTTTGTAGAAAATTGTTGAAAGAAGTAGAAGCACAGTCAAAAGGCCAAGCAAAAATTTGGAAGAGGATTGACTTAGAGGCAGCAAACATCCTTAAGAAGGAAGGAAAATATATTAATGAAGGCAAGATCTTTGGTTCTGTTCCTGGGGTTGAAATAGGTGATGAGTTTGACTATAGAGTGGAGCTTAATTTAGTTGGTCTTCATCACAATATACAGGCTGGCATAGATTATGCAACGCGCAATGGGCACGGGGGGAATGTGATGTCCAAAAAGAAAGAACCTGAAGACCAGAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTAGCAAGAAAAAGAATCCTGTTAGAGTGATACGCGGTGCTTTCTTTGGAGGTGGAAGTCGTAGGACATTTGTGTATGATGGACTGTATGAAGTTGAGTCATACTGGCAAGAAAGGGGGCCACATGGCAAGATGGTTTTCAAGTTTCAGCTACGAAGAATCCCAAATCAACCCGAGCTTCCTTGGCTTACGTGA 1122 0.4225 MPTSVLDGQSGDKLLRKPFAIRDYPPGVGPNAARIHVKPKEDTAKGGEANLQHSASRRFVSAIRDYPPFCGRNSRGLSKADVSKLMQRRLAGVREERKRKLDCLTRGDLSKAVMRTEDSLNHSNMKVLKKKEGNAASGAMAKLVVIGKNGHDTNYRRKFSDGHRSYGVNVPLLHHRNLSIHNSNSIVPRITVRDTLRSFQALCRKLLKEVEAQSKGQAKIWKRIDLEAANILKKEGKYINEGKIFGSVPGVEIGDEFDYRVELNLVGLHHNIQAGIDYATRNGHGGNVMSKKKEPEDQKLERGNLALKNSSKKKNPVRVIRGAFFGGGSRRTFVYDGLYEVESYWQERGPHGKMVFKFQLRRIPNQPELPWLT 373
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01427 373 Gene3D - 227 282 IPR036987 -
Accr13g01427 373 MobiDBLite consensus disorder prediction 283 307 - -
Accr13g01427 373 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 118 368 - -
Accr13g01427 373 SMART G9a_1 241 366 IPR003105 -
Accr13g01427 373 SUPERFAMILY PUA domain-like 228 371 IPR015947 -
Accr13g01427 373 ProSiteProfiles YDG domain profile. 221 362 IPR003105 -
Accr13g01427 373 Pfam SAD/SRA domain 282 366 IPR003105 -
Accr13g01427 373 MobiDBLite consensus disorder prediction 287 307 - -
Accr13g01427 373 Gene3D - 283 373 IPR036987 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01427 Accr-Chr13 21840754 21841956 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01427 189 367 Su(var)3-9 homologs AT5G04940 38.571 1.56e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01427 K11420 - tpra:123908193 263.848