Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01425 ATGAGAACTGGTCTTGATGAGTATCTGTTTGACATAGGTAAGAACTTGATCAATAATGGTATACTTTCTGATGGAGTCTCCAGGCCTGAAGTCTCTGAGGGTGGTGGTGGTTTCACCATTGATGCAGCTCGGTACGGTAATCTGGGCAGATTTTTCAACCATAGTTGTGTCCCTAATATGTATGCACAAGATGTTTTGTATGATCATGGCGACCGCAGGATTCCTCACATAATGCTGTTTGCCGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCAAAAGATCAAATCTTCAATTCTGACGGCAGCATAAAGAAGAAGGATTGCTTTTGTGGCTCTGTGGGATGCACTGGAAGGATGTATTGA 381 0.4199 MRTGLDEYLFDIGKNLINNGILSDGVSRPEVSEGGGGFTIDAARYGNLGRFFNHSCVPNMYAQDVLYDHGDRRIPHIMLFAAENIPPLKELTYDYNYSKDQIFNSDGSIKKKDCFCGSVGCTGRMY 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01425 126 SMART PostSET_3 110 126 IPR003616 -
Accr13g01425 126 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 6 118 - -
Accr13g01425 126 SUPERFAMILY SET domain 8 123 IPR046341 -
Accr13g01425 126 ProSiteProfiles Post-SET domain profile. 110 126 IPR003616 -
Accr13g01425 126 Gene3D SET domain 1 126 IPR046341 -
Accr13g01425 126 SMART set_7 8 102 IPR001214 GO:0005515
Accr13g01425 126 Pfam SET domain 36 96 IPR001214 GO:0005515
Accr13g01425 126 ProSiteProfiles SET domain profile. 1 96 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01425 Accr-Chr13 21778699 21779079 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01425 6 126 EF-hand Containing Proteins AT5G13960 39.552 1.83e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr13g01425 SET 3.5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01425 K11420 - qsu:111989703 182.57