Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01420 ATGGCTATTCTTCCTTATTTGCTTCTTCTTTCCCATCTGCTTTTGTTCTTCTCCAGGTTTTCTTTTGCAACTGATACCCTCACCCAGTTTGAGTCTCTTCCTGATGGCCAGACCTTGGTTTCTGAAAATGGAATCTTTGAAATGGGTTTCTTCAGCCCAGGTAGTTCCACAGACCGCTATGTTGGGATCTGGTACCACAAAATCCCGGGTAGAACTGTTGTTTGGGTTGCCAACCGAGATAGACCCATCAAAAACAACTCTGGCCTGTTGAGCATAAACGCAAAGGGACATGCTGTACTTCTCAGCAATGATGATACTGTTGTTTGGTTGGCAAATTCCACCAAAAAGGCCTTGAGTCCAATTTTGCAGCTTTTAGGCTCTGGAAACTTGGTTCTAAGGGAAGGGAAAGATCTAAAGCCCCAAAATTACTTGTGGCAAAGCTTTGACTATCCTTCTGATACAATTTTACCAGGAATGAAGTTTGGATGGGACCTGAGAACTCGCCTTAATCGACGTTGTACAGCTTGGAAGAATTGGGACGACCCTTCTACTGGAGACTTTAGAGCTGAGCTTTTACTACACAATTATCCTGATATAGCAAACTGGCAGGGCCTAATAGAGCAGTCGAGGAGTGGCCCCTGGAATGGTGTCCGATTGAGTGGCCACTCTCATGTGACGACTAATCCACTTGATGAAATGAAGTTCGTCTGGAATAAAGATGAGGTGTACTTACTTTATAAAATCATAAATGAATCACTGATTACAAGAGTTGTCTTAAACCAAACATTATACTCTGTGGTGGACTCAATATGGAGCGAAGATGATCAAAGGTGGATTACTTTTAGCTTTGCGCCAGGTGATAATTGCGACATGTATAATCGTTGTGGTCCTAATGGAATCTGCGTCCTGGGTGAGACACCAATATGCCAGTGCTTGACAGGATTCTTGCCGAAATCTCCCAAAAATTGGAATGCAATGGACTGGTCAAGAGGATGCATCCGCAATAATTCATGGAGTTGCAGGGGAAACAATAAAGATTATTTTGTCAAGTTTAGTGGGCTGAAATTGCCGGATACTACATACACGTGGGCTAATGCCAATATGACACTTGAGGAATGCAAAGCCAAATGCTGGGAAAATTGTTCTTGTAATGCTTATGCGAACTCAGATATCAGGGAAGGAGGTAGTGGTTGTGTTATGTGGTTCGGTGATTTAATTGATATAAGGAAGGTTCCCTTTGATGACCAGCATTTATATATTCGCCTTGCTTCTCCAGAAACAGCTGAACTCGATGAAGCTAATGGAAATAAGACAACGGTGATTGCTGTAACAGTGACAACTTTGTTGGCTGTTGTGATGCTTTTCACCTTGTTTTACATTTACACCCGCAGAAGAACCTCTACAGGAAACAAGGAAGAAGGCTCTGACGGAAATATGGAGCTACAAACCTTGATGGCAGAAAACAATGAAGTAGGCTATGAAGGAAATATGGAGCAACGTATCTATGACCTTGCAATAATAGTTAATGCTACTAATAACTTCTCACCAGACAACAAGCTTGGCGAAGGTGGTTTTGGCCCTGTATACCGGGGTATACTTTCTGACGGACAAGAAATTGCGGTGAAACGGCTTTCACAAAGTTCTTTTCAAGGTGTTTGTGAATTCAAGAATGAAGTCAAATTGTGTGCCAAACTTCAACACCGTAATCTTGTCAAGGTTCTTGGTTGTTGCATACAAGGAGAGGAGAAAATGCTCATATATGAATACATGCCCAACAAGAGCTTAGATTCAATTATTTTTGGTTCTGAAAGTAAACTTCTTGATTGGTCCAAGCGCTTTCACATTATTTGTGGGATTGCCCGGGGCCTTATGTATCTTCATCAAGATTCTAGATTAAAAATCGTTCATAGAGATCTTAAAGCAAGTAACATATTATTGGATGGAGAGTTAAATCCAAAAATCTCAGATTTTGGCTTGGCAAGAATATTTGGAGGAGATAAAAAAGAAGATAATACAAAGCAAATAGTTGGTACATTTGGTTATATGGCTCCGGAATACGCAATTCATGGACTATTTTCGGTCAAATCTGACGTGTTCAGCTTTGGAGTATTACTGCTAGAAATAGTGAGTGGAATGAAAAACCGGGGGCCCTTCTTGCCAAGCCAAAGCGTTAATCTCATTGGACATGCATGGAGGATGTGGAATGAGGGAGTCCCATTAAAATTAGCCAATGAACATTTGAAGAAATCTTACATTGAATCAGAAGTATTGCGATGTATCCATATCGGTCTTCTTTGTCTGCAATACCAAGCTGATGACAGGCCAGACATGACATATGTGGTCATAATGTTGAATAGTGAGGGTGTGTTGCCTGAGCCTAAAGAACCTGGTTTCCTTTTGGATCATATCCCAGTTAGGGGAGAATCTCCTAATAATCATGCAACTCCTTCGAGTAATGAAGTATCTATGACCATATTAGAAGCTAGGTAA 2490 0.4112 MAILPYLLLLSHLLLFFSRFSFATDTLTQFESLPDGQTLVSENGIFEMGFFSPGSSTDRYVGIWYHKIPGRTVVWVANRDRPIKNNSGLLSINAKGHAVLLSNDDTVVWLANSTKKALSPILQLLGSGNLVLREGKDLKPQNYLWQSFDYPSDTILPGMKFGWDLRTRLNRRCTAWKNWDDPSTGDFRAELLLHNYPDIANWQGLIEQSRSGPWNGVRLSGHSHVTTNPLDEMKFVWNKDEVYLLYKIINESLITRVVLNQTLYSVVDSIWSEDDQRWITFSFAPGDNCDMYNRCGPNGICVLGETPICQCLTGFLPKSPKNWNAMDWSRGCIRNNSWSCRGNNKDYFVKFSGLKLPDTTYTWANANMTLEECKAKCWENCSCNAYANSDIREGGSGCVMWFGDLIDIRKVPFDDQHLYIRLASPETAELDEANGNKTTVIAVTVTTLLAVVMLFTLFYIYTRRRTSTGNKEEGSDGNMELQTLMAENNEVGYEGNMEQRIYDLAIIVNATNNFSPDNKLGEGGFGPVYRGILSDGQEIAVKRLSQSSFQGVCEFKNEVKLCAKLQHRNLVKVLGCCIQGEEKMLIYEYMPNKSLDSIIFGSESKLLDWSKRFHIICGIARGLMYLHQDSRLKIVHRDLKASNILLDGELNPKISDFGLARIFGGDKKEDNTKQIVGTFGYMAPEYAIHGLFSVKSDVFSFGVLLLEIVSGMKNRGPFLPSQSVNLIGHAWRMWNEGVPLKLANEHLKKSYIESEVLRCIHIGLLCLQYQADDRPDMTYVVIMLNSEGVLPEPKEPGFLLDHIPVRGESPNNHATPSSNEVSMTILEAR 829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01420 829 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 11 775 - -
Accr13g01420 829 SMART serkin_6 514 784 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01420 829 ProSiteProfiles PAN/Apple domain profile. 340 424 IPR003609 -
Accr13g01420 829 ProSitePatterns Serine/Threonine protein kinases active-site signature. 634 646 IPR008271 GO:0004672|GO:0006468
Accr13g01420 829 Gene3D Phosphorylase Kinase; domain 1 477 589 - -
Accr13g01420 829 Pfam Protein tyrosine and serine/threonine kinase 517 781 IPR001245 GO:0004672|GO:0006468
Accr13g01420 829 CDD PAN_AP_plant 339 423 - -
Accr13g01420 829 Pfam S-locus glycoprotein domain 210 319 IPR000858 GO:0048544
Accr13g01420 829 PIRSF SRK 1 829 IPR024171 GO:0004674
Accr13g01420 829 CDD B_lectin 31 151 IPR001480 -
Accr13g01420 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 478 589 - -
Accr13g01420 829 Gene3D Transferase(Phosphotransferase) domain 1 590 789 - -
Accr13g01420 829 Gene3D - 19 148 IPR036426 -
Accr13g01420 829 Gene3D Hepatocyte Growth Factor 340 421 - -
Accr13g01420 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 590 792 - -
Accr13g01420 829 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 182 IPR036426 -
Accr13g01420 829 Pfam D-mannose binding lectin 72 177 IPR001480 -
Accr13g01420 829 SMART ntp_6 343 422 IPR003609 -
Accr13g01420 829 SMART blect_4 30 151 IPR001480 -
Accr13g01420 829 CDD STKc_IRAK 520 785 - -
Accr13g01420 829 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 19 148 - -
Accr13g01420 829 Pfam PAN-like domain 340 408 IPR003609 -
Accr13g01420 829 ProSiteProfiles Protein kinase domain profile. 514 790 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01420 829 ProSiteProfiles EGF-like domain profile. 285 321 IPR000742 -
Accr13g01420 829 ProSiteProfiles Bulb-type lectin domain profile. 24 145 IPR001480 -
Accr13g01420 829 SUPERFAMILY Protein kinase-like (PK-like) 498 787 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01420 Accr-Chr13 21728845 21732063 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01420 423 829 Receptor kinase-like Gene Family AT4G05200 47.406 1.58e-120 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01420 PK_Tyr_Ser-Thr 3.2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01420 - - pcin:129322539 1015.76