Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01418 ATGGCTACATCTTCATCAGTTCTTGATGGTCATTCTGAAGAAAGAATGCTAAGGAAGCTATCTGCATATCGTAATTACCCGCCTGGCGTTGGACGGACTAGCAGATTTTTTCCTGTAAGAAGAGTCTCAGCCGTTAGAGACTATCCTCCATTTTGTGGGCCCAATGCTCTGAGTCTCAGTAAGGGAGATGTTTCCAAGGGCAATGGTACAGAAGAAAGGAAGAGAGAATTTGATTTCCTTGCACGGGGCGGTGGCTCTAAAACTGTGATGACGGCTAGAAAATCTGTGAATCATTCCTGGATGATGCTTGTGAAAAAGAAAGAAGGCAATGCTTCTTCCTCTGGAGGTATGGATGGAAAATTTTCTGATGCCCACAGATATTGTTATAATGTAAATGTTCCACTTCTATGTCGTGATAATTTGAGCAGAGGCAACAGTGAAGCAGACGTCACTCGAAATACTGTAAGGGAGATAATGCGCTGCTTCCAAGCTGTTTGTAGAAAATTGTTGCAGGAAGAAGAAGCGAAGTTAAAAGGCAAAGCAAAAATTCGTAGGAGGATTGATTTAGAGGCAGCAAAGATACTTAAAAAGGAAGGCAAATATATTAATTCAGGCAAGTACATCTTTGGTTCTGTTCCTGGGGTTGAAATAGGCGATGAGTTTGACTATAGAATGGAGCTTCATTTAGTCGGTCTTCATCGCAATTTACAGGCTGGCATAGATTATACAATGCGCAATGGGCACGGCGGGAATGTGATGTCCAGAAAGAAAGCACCTGAAGACCAGAAGCTCGAGCGGGGTAATCTTGCTTTGAAGAACAGTATCAAGAAAAAGAATCCTGTTAGAGTGATACGTGGTGCTTTCTTTGGAGGTGGAAGTCGTAGAACATTTGTGTATGATGGACTGTATGAAGTTGAGTCATGCTGGCAAGAAAGGGGGCCACATGGCAAGATGATTTTTAAGTTTCAGCTACGAAGAATCCCAAATCAACCAGAGCTTCCCTGGATTGAACTGCAAAATTCCAACATGTTCACGTTAAGGAAGGGTTTGTGTGTTGCTGACATCTCAAATGGTAAAGAGGCATTGCCAATCCTTGCTGTCAATACCATAGATAATGAAAAACCTCCAATCTTTGAATATATCACTAGGATGATCTACCCTAGTTGGTTGCAGCCGACACCTTCTAAGGGATGTAACTGTACGGACAGATGCTCTGACCCTACAACATGTTCCTGTGCTGGGGAAAATGGAGGAATCCCATTCAATCACACAGGATGTATAGTAGAAGTAAAGCCCCTAGTCTATGAGTGTGGCCCTTCTTGCAAATGCCCTCCTGATTGCTATAACAGAGTTAGCCAAAATGGCATAAAATTCCCACTCGAAATTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTGCGCTCCATCCCTTCTGGAAGATTTGTATGTGAATACATAGGAGAGTTGCTTGAAGACAAGGAAGCTGAGGAAAGAAGTGGTCATGATGAGTATCTTTTCGATATTGGTGGTAATTTGATAAAAGATGCTTTAGATTCTGGTGGTGGCTTCACCATCGATGCAGCCCGCTTCGGTAATCTGGGCAGATTTTTCAACCATAGCTGTGCCCCTAATATGTATGCACAAAATGTTCTGTATGATCATGGCGACCACAGGATTCCTCACATAATGCTCTTTGCTGCTGAGAACATTCCTCCATTAAAAGAGCTGACTTATGATTACAATTACTCAAAAGATGAAATCTTCGATTCGGATGCCAACATAAAGAAGAAAAATTGCTATTGCGGCTCTGTGGGGTGTACTGGAAGGATTTATTGA 1842 0.4235 MATSSSVLDGHSEERMLRKLSAYRNYPPGVGRTSRFFPVRRVSAVRDYPPFCGPNALSLSKGDVSKGNGTEERKREFDFLARGGGSKTVMTARKSVNHSWMMLVKKKEGNASSSGGMDGKFSDAHRYCYNVNVPLLCRDNLSRGNSEADVTRNTVREIMRCFQAVCRKLLQEEEAKLKGKAKIRRRIDLEAAKILKKEGKYINSGKYIFGSVPGVEIGDEFDYRMELHLVGLHRNLQAGIDYTMRNGHGGNVMSRKKAPEDQKLERGNLALKNSIKKKNPVRVIRGAFFGGGSRRTFVYDGLYEVESCWQERGPHGKMIFKFQLRRIPNQPELPWIELQNSNMFTLRKGLCVADISNGKEALPILAVNTIDNEKPPIFEYITRMIYPSWLQPTPSKGCNCTDRCSDPTTCSCAGENGGIPFNHTGCIVEVKPLVYECGPSCKCPPDCYNRVSQNGIKFPLEIYKTDKRGWGVRSLRSIPSGRFVCEYIGELLEDKEAEERSGHDEYLFDIGGNLIKDALDSGGGFTIDAARFGNLGRFFNHSCAPNMYAQNVLYDHGDHRIPHIMLFAAENIPPLKELTYDYNYSKDEIFDSDANIKKKNCYCGSVGCTGRIY 613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01418 613 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 62 613 IPR025794 GO:0016571
Accr13g01418 613 ProSiteProfiles Pre-SET domain profile. 396 455 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr13g01418 613 ProSiteProfiles SET domain profile. 458 583 IPR001214 GO:0005515
Accr13g01418 613 Gene3D - 191 246 IPR036987 -
Accr13g01418 613 Gene3D - 247 347 IPR036987 -
Accr13g01418 613 Pfam Pre-SET motif 355 450 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr13g01418 613 SUPERFAMILY SET domain 342 590 IPR046341 -
Accr13g01418 613 SMART G9a_1 205 330 IPR003105 -
Accr13g01418 613 SMART preset_2 352 442 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr13g01418 613 Gene3D SET domain 348 613 IPR046341 -
Accr13g01418 613 SUPERFAMILY PUA domain-like 191 338 IPR015947 -
Accr13g01418 613 SMART set_7 458 589 IPR001214 GO:0005515
Accr13g01418 613 ProSiteProfiles Post-SET domain profile. 597 613 IPR003616 -
Accr13g01418 613 ProSiteProfiles YDG domain profile. 172 326 IPR003105 -
Accr13g01418 613 Pfam SAD/SRA domain 246 330 IPR003105 -
Accr13g01418 613 Pfam SAD/SRA domain 209 245 IPR003105 -
Accr13g01418 613 Pfam SET domain 469 583 IPR001214 GO:0005515
Accr13g01418 613 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 116 605 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01418 Accr-Chr13 21694181 21696103 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01418 152 610 Su(var)3-9 homologs AT5G04940 35.590 3.97e-93 299
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr13g01418 SET 2.9e-20 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01418 K11420 - qsa:O6P43_024410 657.521