Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01416 ATGGCTACACCAATATCAGTTGTTGATGGTCATTCTGAAGAAAAAATGAATAGTAAGCCATCTGCAATTCTTGATCACCCACCTGGGTTTGGACCGAAATTAGCTAGTTCGAATGATTATTTGCAGAAGTCTGGGACCGGAAGGATTCCTTCTGCAAGAAGAGTTTCAGCCATTAGAGACTATCCTCCATTTTGTGGGCCTAATGCTCTGAGTGTGAGTAAGGGAGATGTTTCCAAGGGCATGCTCATGGACGTACATTTGAGTGGTGGTACAGAAGAAAGGAAGAGAAAGTTTGATTGCCTTGCACAGTTTACTGGGTCTAAAACTGTGATGACAGCTAAAAAATCTGTGAATCATTCCAGAATGATATTTGTGAAGAAAGAAGGAAATGCTTCTTCTGGAGGTATGGATGGAAAATTTTCTGATGTCCACAGATCATATGGTTATAGTGTAAATGTTCCTCTTCTACGTCATGATAATTTGAGCAGTAGCAAAAGTGACACAATTGTGACCCGAAATACTGTAAGAGAGATAATGCGCTGGTTCCAAGCTGTTTGTAGAAAATTATTGCAAGAAGAAGAAGCAAAGTTAAAAGGCAAAGCAAAAATTCATAGGAGGATTGATTTAGAGGCAGCAAAGATCCTTAAAAGGGAAGGCAAATATGTTAATGTTGACAAGCTGATCTTTGGTTCTGTCCCTGGGATTGAAATAGGGGATGAGTTTGATTATAGAGTGGAGCTTCGTCTAGTCGGTCTTCACCGCAATTTACAGGCTGGCATTGATTATGCAATGCACAATGGTGAACATCTTGCAACTAGTATTGTTGCATCAGGAGGATACGATGATGAATTGGACAGTTCAGGTGTTTTGATTTATACAGGACACGGGGGGAATGTGGTGTGCAGTAGGAAACAGCCTGAAGACCAAAAGCTTGAGCGGGGTAATCTTGCTTTGAAGAACAGTAGCAAGAAAAAGAATCCTGTTAGAGTGATACGTGGTGCTTTCTTTGGAGGTGGAAGTCGTAGGAGATTTGTGTATGATGGACTGTATGAAGTTGAGACATTCTGGCAAGAAATGGGACCATATGACAAGAGGATTTTCAAGTTTAAGCTTCGAAGAAACCCAAATCAACCAGAGCTTCCTTGGATTGAACTGGAGAATTCAAAAATGTTCACATTAAGGATGGGTTTATGTGTTGGTGACATCTCACATGGTAAAGAGGCTTTACCAATTCGGGCTGTGAATACCATAGATCATGAAAAACCACCATCATTTGAATACATTACTAGAATGATCTATCCTGATTGGTTGCATCCGGCACCTGCTAAAGGATGTAACTGTATTGACAGATGCTCTGACCCTACAAGATGTTCTTGTGCTGTTAAAAATGGAGGAATCCCATTTAATCACACAGGGTGTATTGTAGAAGTAAAGCCTCTAGTCTACGAGTGTGGTCCTTCTTGCAAATGCCCTCCAGATTGCTATAACAGAGTCAGCCAACATGGCATAAAATTCCCACTTGAAATTTATAAAACTGACAAAAGGGGATGGGGTGTGAGATCTCTACACTCCATCCCTTCTGGAAGTTTTGTATGTGAATACATAGGAGAGTTGCTTGAAGAGAAGGAAGCTGAACAAAGAACTGGTCATGATGAGTATCTGTTTGCGATGGGTAATAACTTGATCAAGAATGGTATACTTTCTGATGGAATTTCCACGCTTGAAGTCTCTGAGGATGGTGGTGGCTTCACCATCGATGCAGCTCGATATGGTAATCTGGGCAGGTTTTTCAACCATAGTTGTTCCCCTAATATGTATGCACAAAATGTTCTGTATGATCATGGGGACCGCAGGATTCCTCATATAATGTTGTTTGCTGCTGAGAACATTCCTCCATTAAAAGAGCTGACCTATGATTACAATTACTTGAAAGATCAAATCTTCGATTCTGATGGCTACATAAAGAAGAAGGATTGCTATTGTGGTTCTGTGGGGTGTACTGGAAGGATGTATTGA 2016 0.4072 MATPISVVDGHSEEKMNSKPSAILDHPPGFGPKLASSNDYLQKSGTGRIPSARRVSAIRDYPPFCGPNALSVSKGDVSKGMLMDVHLSGGTEERKRKFDCLAQFTGSKTVMTAKKSVNHSRMIFVKKEGNASSGGMDGKFSDVHRSYGYSVNVPLLRHDNLSSSKSDTIVTRNTVREIMRWFQAVCRKLLQEEEAKLKGKAKIHRRIDLEAAKILKREGKYVNVDKLIFGSVPGIEIGDEFDYRVELRLVGLHRNLQAGIDYAMHNGEHLATSIVASGGYDDELDSSGVLIYTGHGGNVVCSRKQPEDQKLERGNLALKNSSKKKNPVRVIRGAFFGGGSRRRFVYDGLYEVETFWQEMGPYDKRIFKFKLRRNPNQPELPWIELENSKMFTLRMGLCVGDISHGKEALPIRAVNTIDHEKPPSFEYITRMIYPDWLHPAPAKGCNCIDRCSDPTRCSCAVKNGGIPFNHTGCIVEVKPLVYECGPSCKCPPDCYNRVSQHGIKFPLEIYKTDKRGWGVRSLHSIPSGSFVCEYIGELLEEKEAEQRTGHDEYLFAMGNNLIKNGILSDGISTLEVSEDGGGFTIDAARYGNLGRFFNHSCSPNMYAQNVLYDHGDRRIPHIMLFAAENIPPLKELTYDYNYLKDQIFDSDGYIKKKDCYCGSVGCTGRMY 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01416 671 SMART PostSET_3 655 671 IPR003616 -
Accr13g01416 671 ProSiteProfiles Pre-SET domain profile. 443 502 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr13g01416 671 ProSiteProfiles Post-SET domain profile. 655 671 IPR003616 -
Accr13g01416 671 SUPERFAMILY SET domain 390 661 IPR046341 -
Accr13g01416 671 ProSiteProfiles SET domain profile. 505 641 IPR001214 GO:0005515
Accr13g01416 671 SMART set_7 505 647 IPR001214 GO:0005515
Accr13g01416 671 SMART preset_2 399 489 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr13g01416 671 MobiDBLite consensus disorder prediction 1 29 - -
Accr13g01416 671 SMART G9a_1 225 377 IPR003105 -
Accr13g01416 671 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 81 671 IPR025794 GO:0016571
Accr13g01416 671 ProSiteProfiles YDG domain profile. 230 373 IPR003105 -
Accr13g01416 671 Gene3D - 212 394 IPR036987 -
Accr13g01416 671 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE SETMAR 156 663 - -
Accr13g01416 671 Pfam Pre-SET motif 402 497 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Accr13g01416 671 Pfam SET domain 516 641 IPR001214 GO:0005515
Accr13g01416 671 Gene3D SET domain 395 671 IPR046341 -
Accr13g01416 671 SUPERFAMILY PUA domain-like 218 386 IPR015947 -
Accr13g01416 671 Pfam SAD/SRA domain 229 377 IPR003105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01416 Accr-Chr13 21605729 21607744 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01416 154 668 Su(var)3-9 homologs AT5G04940 38.519 1.84e-107 338
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Accr13g01416 SAD_SRA 4.4e-47 CL0178
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01416 K11420 - qsa:O6P43_024410 728.398