Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01415 ATGTTTGTGCATAGAAACTCCATAGCTGTTTTGGTGATTCCCATTATTGCTGTTTTTGCATATTTCATTGGCGTCCATGAGACTAATCAAAATGAGCAGTCCTTTGTGGGTGATCTGTTGTCGTCGTCTCCTTTAAGTTGTGGTCATCGGCGCGGCCGCCGCCGCCACCACCACCACCACCACCATTCCCACAACAAGAAGCGACCTGATGACAGTGAGATTGTCAGTAACATATGCGATGACTTTCCACCGGAAATTCCACCGCCGAACACCAACACGACATCGTATCTGTGTGTGGATCGACGAGGGTGCTGCAATTTCACCACTGTGCAAGCAGCTGTAAACGCTGTCCCAGATTTCAGCGATAAAAGAAACATCATATGGATTAACAGTGGCCTTTATTATGAGAAAGTGATGGTGCCAAAAAGCAAACCAAACATCACATTTGAAGGACAGGGCTACACTTCAACGGCAATTGCATGGAACGACACTGCCAAGTCAGCAAACGGCACATTCTATAGTGGCTCCGTCCAAGTCTTCGCCTCCAACTTCATTGCCAAAAACATAAGCTTCATGAATGTGGCACCAATTCCAGGCCCAGGGGTGGAAGGAGCACAAGCAGTGGCAATAAGAATAGGGAGTGATCAAGCTCAGTTCTGGGGATGTGGGTTTTTTGGAGCACAAGATACTCTTCATGATGATAAGGGTCGCCATTACTTTAGGGATTGTTATATCCAAGGCTCCATTGATTTCATCTTTGGCAATGCAAGGTCTCTTTATGAGAATTGTCAAATAGTGTCAATGGCCGACCCAGTCCCGCCGGGGCAAAAGTTCATAAACGGCGCCGTTACAGCACAAGGGAGGTCATCAAACAACGAAAACACAGGCTTTGCTTTTGTCAACTGTAGCATAGGAGGCTACGGAAGAATATGGTTAGGTCGGGCATGGCGTAATTATTCTCGTGTCGTTTTTGCCTTTACGACAATGTCTGATATTATTGCCCCTGAAGGTTGGAACGACTTCAATGACCCTTCAAGAGATCAGACAATATTCTATGGAGAATACAACTGCACAGGGCCAGGGGCTAATATGAAGATGAGGGCACCATATGTACAGAGATTAAATGATACAATTGCTTCTTATTTCCTTAACACATCATTTATTGATGGAGACCAATGGTTGTTCCCTCCCAAATAA 1197 0.4545 MFVHRNSIAVLVIPIIAVFAYFIGVHETNQNEQSFVGDLLSSSPLSCGHRRGRRRHHHHHHHSHNKKRPDDSEIVSNICDDFPPEIPPPNTNTTSYLCVDRRGCCNFTTVQAAVNAVPDFSDKRNIIWINSGLYYEKVMVPKSKPNITFEGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGVEGAQAVAIRIGSDQAQFWGCGFFGAQDTLHDDKGRHYFRDCYIQGSIDFIFGNARSLYENCQIVSMADPVPPGQKFINGAVTAQGRSSNNENTGFAFVNCSIGGYGRIWLGRAWRNYSRVVFAFTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCTGPGANMKMRAPYVQRLNDTIASYFLNTSFIDGDQWLFPPK 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01415 398 SUPERFAMILY Pectin lyase-like 96 395 IPR011050 -
Accr13g01415 398 Gene3D - 90 396 IPR012334 -
Accr13g01415 398 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 85 394 - -
Accr13g01415 398 MobiDBLite consensus disorder prediction 48 65 - -
Accr13g01415 398 FunFam Pectinesterase 91 398 - -
Accr13g01415 398 ProSitePatterns Pectinesterase signature 2. 245 254 IPR033131 -
Accr13g01415 398 MobiDBLite consensus disorder prediction 47 71 - -
Accr13g01415 398 Pfam Pectinesterase 99 391 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01415 Accr-Chr13 21597304 21602819 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01415 62 394 Carbohydrate Esterase AT1G05310 72.072 0.0 522
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01415 - - ahf:112696095 577.015