Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01414 ATGTTTGTGCATAGAAACTCCATAGCTGTTTTGGTGATTCCCATTATTGCTGTTTTTGCATATTTCATTGGCGTCCATGAGACTAATCAAAATGAGCAGTCCTTTGTGGGTGATCTGTTGTCGTCGTGTCCTTTAAGTTGTGGTCATCGCCGCGGCGGTCGCCGCCACCACCACCACCGTTCCCACCACAAGAAGCGACCTGATGACAGTGAGATTGTCAGTAACATATGCGATGACTTTCCACCGGAAATTCCACCGCCGAACACCAACACGGCATCGTATCTGTGTGTGGATCGACGAGGGTGCTGCAATTTCACCACTGTGCAAGCAGCTGTAAACGCTGTCCCAGATTTCAGCGATAAAAGAAACATTATATGGATTAACAGTGGCCTTTATTATGAGAAAGTGATGGTGCCAAAAAGCAAACCAAACATCACATTTGAAGGACAGGGCTACACTTCAACGGCAATTGCATGGAACGACACTGCCAAGTCAGCAAACGGCACATTCTATAGTGGCTCCGTCCAAGTCTTCGCCTCCAACTTCATTGCCAAAAACATAAGCTTCATGAATGTGGCACCAATTCCAGGTCCAGGGGTGGAAGGAGCACAAGCAGTGGCAATAAGAATAGGGAGTGATCAGGCTCAGTTCTGGGGATGTGGATTTTTTGGAGCACAAGATACTGTTCACGATGATAAGGGTCGCCATTACTTTAGGGATTGTTATATCCAAGGCTCCATTGATTTCATCTTTGGCAATGCAAGGTCTCTCTATGAGAATTGTCAAATAGTGTCAATGGCCGACCCAGTCCCGCCGGGGCAAAAGTTCATAAACGGCGCCGTTACAGCACAAGGGAGGTCATCAAACAACGAAAACACAGGCTTTGCTTTTGTCAACTGTAGCATAGGAGGCTACGGAAGAATATGGTTAGGTCGGGCATGGTGTAATTATTCTCGTGTCGTTTTTGCCTTTACGACAATGTCTGATATTATTGCCCCTGAAGGTTGGAACGACTTCAATGACCCTTCAAGAGATCAGACAATATTCTATGGAGAATACAACTGCACAGGGCCAGGGGCTAATATGAATATGAGGGCACCATATGTACAGAGATTAAATGATACAATTGCTTCTTATTTCCTTAACACATCATTTATTGATGGAGACCAATGGTTGTTCCCTCCCAAATAA 1191 0.4534 MFVHRNSIAVLVIPIIAVFAYFIGVHETNQNEQSFVGDLLSSCPLSCGHRRGGRRHHHHRSHHKKRPDDSEIVSNICDDFPPEIPPPNTNTASYLCVDRRGCCNFTTVQAAVNAVPDFSDKRNIIWINSGLYYEKVMVPKSKPNITFEGQGYTSTAIAWNDTAKSANGTFYSGSVQVFASNFIAKNISFMNVAPIPGPGVEGAQAVAIRIGSDQAQFWGCGFFGAQDTVHDDKGRHYFRDCYIQGSIDFIFGNARSLYENCQIVSMADPVPPGQKFINGAVTAQGRSSNNENTGFAFVNCSIGGYGRIWLGRAWCNYSRVVFAFTTMSDIIAPEGWNDFNDPSRDQTIFYGEYNCTGPGANMNMRAPYVQRLNDTIASYFLNTSFIDGDQWLFPPK 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01414 396 FunFam Pectinesterase 89 396 - -
Accr13g01414 396 Gene3D - 89 394 IPR012334 -
Accr13g01414 396 SUPERFAMILY Pectin lyase-like 92 393 IPR011050 -
Accr13g01414 396 ProSitePatterns Pectinesterase signature 2. 243 252 IPR033131 -
Accr13g01414 396 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 83 392 - -
Accr13g01414 396 Pfam Pectinesterase 97 389 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01414 Accr-Chr13 21589676 21595431 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01414 66 392 Carbohydrate Esterase AT1G05310 71.865 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01414 - - gmx:100806629 589.726