Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01411 ATGGAAGAAGAAGGCAACACCAGCACACAAGGGTGTGTCATGGATTCTTCGGCTCCAGCTCCGGCTCCGGCTTACCGGGGAGTTCGAAAGCGAAAATGGGGCAAATGGGTGTCGGAAATCCGTGAGCCTGGCAAGAAAACTCGGATATGGTTAGGAAGCTATGAAGAACCGGAAATGGCAGCTGCGGCGTATGACGTTGCGGCTTCACACTTCCGAGGACAGTCGGCACGGCTTAACTTCCCGGAGTTCGGCGGAGTGTTTCCACGGCCGGCGAGCTCCCTACCAGAGGACGTCCGGTTCGCGGCTCAACAAGCGGCACTGATGATGAGGAGACCGTTGAGATGTAGTCAATCAACGAGGGAGGCGGAAGAAGACGCCGTCACAGGTCCAGCGCCAACGACGACGACGGTGGGGCTGTCAGCGAGCCAGATTGAGGCAATTAATGATTGGCCATTGGATTCACCAAAGATGTGGATGCAAATGGCTGAAGCTCCCATAATGTCAGGATTTGATGAGTCCATGGCATTATACAATAACAACGATGAGGATGATCAATTAGAATTAACAAGTTGGGAAGATATAGAGGATGGTTCCATATGGCATTTCTAA 609 0.5238 MEEEGNTSTQGCVMDSSAPAPAPAYRGVRKRKWGKWVSEIREPGKKTRIWLGSYEEPEMAAAAYDVAASHFRGQSARLNFPEFGGVFPRPASSLPEDVRFAAQQAALMMRRPLRCSQSTREAEEDAVTGPAPTTTTVGLSASQIEAINDWPLDSPKMWMQMAEAPIMSGFDESMALYNNNDEDDQLELTSWEDIEDGSIWHF 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01411 202 MobiDBLite consensus disorder prediction 1 26 - -
Accr13g01411 202 MobiDBLite consensus disorder prediction 1 15 - -
Accr13g01411 202 PRINTS Ethylene responsive element binding protein signature 63 83 IPR001471 GO:0003700|GO:0006355
Accr13g01411 202 PRINTS Ethylene responsive element binding protein signature 25 36 IPR001471 GO:0003700|GO:0006355
Accr13g01411 202 MobiDBLite consensus disorder prediction 113 136 - -
Accr13g01411 202 FunFam Ethylene-responsive transcription factor 2 23 82 - -
Accr13g01411 202 CDD AP2 25 82 IPR001471 GO:0003700|GO:0006355
Accr13g01411 202 ProSiteProfiles AP2/ERF domain profile. 24 81 IPR001471 GO:0003700|GO:0006355
Accr13g01411 202 SUPERFAMILY DNA-binding domain 24 81 IPR016177 GO:0003677
Accr13g01411 202 Pfam AP2 domain 23 73 IPR001471 GO:0003700|GO:0006355
Accr13g01411 202 Gene3D AP2/ERF domain 24 82 IPR036955 GO:0003700|GO:0006355
Accr13g01411 202 SMART rav1_2 24 86 IPR001471 GO:0003700|GO:0006355
Accr13g01411 202 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 21 151 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01411 Accr-Chr13 21557793 21558401 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01411 24 200 AP2-EREBP Transcription Factor Family AT1G71450 46.328 3.82e-46 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Accr13g01411 AP2 6.7e-13 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01411 - - zju:107421431 208.379