Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01409 ATGGGTGAGAATGGCTTGGATGGCCATGCGACTGAGCATGATAAGGCAACCACATCAAAGAATCACACAGAGACCAACACAAACGAGGAAAACAGAGAGATGGCAAAGCAAAAAGGAAAAGCCGACACAGTTCCATTTCACAAGCTGTTCTCATTTGCGGATTACACCGATATTCTGTTAATGATCGCTGGCACCATTGGGGGCATCAGAAACGGTATGGCTTTGCCTCTCATGATGTTACTGATAGGCAAAATGATCAATGCTTTTGGTAATAACCAGCACAGTAGCGACATCACTGCAATAGTTTCCAAGGTTTCTTTGAATTTTGTGTACTTGGCAGTAGGAAGTGGCGTGGCAGCGTTCCTTCAGGTGTCTTGCTGGATGATCACAGGGGAAAGACAGGCTGCGCGCGGATAA 417 0.4628 MGENGLDGHATEHDKATTSKNHTETNTNEENREMAKQKGKADTVPFHKLFSFADYTDILLMIAGTIGGIRNGMALPLMMLLIGKMINAFGNNQHSSDITAIVSKVSLNFVYLAVGSGVAAFLQVSCWMITGERQAARG 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01409 138 PANTHER ABC TRANSPORTER B FAMILY 19 137 IPR039421 -
Accr13g01409 138 Pfam ABC transporter transmembrane region 61 136 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Accr13g01409 138 Gene3D ABC transporter type 1, transmembrane domain 39 137 IPR036640 GO:0005524|GO:0016020
Accr13g01409 138 SUPERFAMILY ABC transporter transmembrane region 48 136 IPR036640 GO:0005524|GO:0016020
Accr13g01409 138 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01409 Accr-Chr13 21540949 21541639 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01409 37 137 Calmodulin-binding Proteins AT2G36910 32.353 3.05e-15 69.3