Gene search

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01400 626 CDD STKc_CDK9_like 135 421 - -
Accr13g01400 626 SUPERFAMILY Protein kinase-like (PK-like) 129 429 IPR011009 -
Accr13g01400 626 Gene3D Transferase(Phosphotransferase) domain 1 223 461 - -
Accr13g01400 626 FunFam probable serine/threonine-protein kinase At1g54610 218 461 - -
Accr13g01400 626 PANTHER CELL DIVISION PROTEIN KINASE 133 427 - -
Accr13g01400 626 MobiDBLite consensus disorder prediction 480 511 - -
Accr13g01400 626 MobiDBLite consensus disorder prediction 1 26 - -
Accr13g01400 626 SMART serkin_6 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01400 626 ProSitePatterns Serine/Threonine protein kinases active-site signature. 255 267 IPR008271 GO:0004672|GO:0006468
Accr13g01400 626 Gene3D Phosphorylase Kinase; domain 1 129 222 - -
Accr13g01400 626 ProSitePatterns Protein kinases ATP-binding region signature. 141 164 IPR017441 GO:0005524
Accr13g01400 626 Pfam Protein kinase domain 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01400 626 MobiDBLite consensus disorder prediction 7 23 - -
Accr13g01400 626 MobiDBLite consensus disorder prediction 523 543 - -
Accr13g01400 626 MobiDBLite consensus disorder prediction 440 460 - -
Accr13g01400 626 ProSiteProfiles Protein kinase domain profile. 135 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01400 626 FunFam probable serine/threonine-protein kinase At1g54610 122 217 - -
Accr13g01400 626 MobiDBLite consensus disorder prediction 420 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01400 Accr-Chr13 21314308 21318712 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01400 130 461 Core Cell Cycle Gene Families AT5G10270 50.716 7.71e-115 351
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Accr13g01400 Pkinase 2.1e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01400 K08819 - qsa:O6P43_030056 749.584