Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01398 ATGGGATCTCAAAACGGAGAGCATTATTCAGCATCAACACTCTTTCATGCTCAAACCCACATATGGAACCATATCTTCAGCTTCATAAACTCAGTGTCACTCAAATCTGCAATTGATTTGAACATTCTAGACATCATTCACAAACATGGGAAACCCATGACTCCTGCGCTTCTTATCTCTTCCCTTCATATCCATCCTTCTAAAACTCACAATATCTATCGCTTAATGCGAATCCTCATTCATTCTGGCTTCTTCTCTCTCCACAAACTTCCTGATGAAACTGAAAAAGCCTATGTCCTTACCGATGCATCGATCCTTCTTTTGAAGGACAATCCCTTTAGTGTCACCCCTTTCTTACTTGCCATGCTGGATCCCATCCTAACAAAGCCTTGGTATCAGTTGGCTAACTGGTTCCAAAACGACAATCCGACGCCGTTCAACACGGCACATGGAAAGACATTTTGGGAGTACGCTGGGGTTGAGCCTAAGCTTAACCATCTTTTCAATGAAGCCATGGCCAGTGATGCGAGGTTGGTGACCAGTGTGGTTATTGACAAGTGTAAGGGTGTATTCAATGGATTAGATTCACTAGTGGATGTTGGGGGAGGTACTAGGACAGCGGCTAAGGCTATTGCCAAAGCATTTCTAGAAATACAATGTACAGTGTTCGATCTCCCACACGTTGTTGATGGTCTCCAAGGCAGTGGGAATCTCAAGTTTGTGAGAGGAGACATGTTCGAGGCCATTCCTCCTTCTGATGGCATACGTTTGAAGTGGATTCTGAATTCTTGGAACGATGAGGAGTGTGTGAAGATACTGAAGAAGAGTAAGGAGGCAATTACAAGCAAAGGAAAAGAAGGGAAGGTGATTATAATAGACATGGTGATGGAGAACTCTAAAGGAGATATTGATGATGAATCGGTTGAAACACAATTGTTCTTTGATATGTTGATGATGGTTGTGGTCACTGGAAAAGAGAGGAACGAGAAAGAATGGGCTCAGTTGATATCCTCTGCTGGTTTTAGTGACTATAAGATTACTCATGTTCTTGGCTTAAGATCTCTCATTGAGGTTTTCCCATGA 1083 0.4266 MGSQNGEHYSASTLFHAQTHIWNHIFSFINSVSLKSAIDLNILDIIHKHGKPMTPALLISSLHIHPSKTHNIYRLMRILIHSGFFSLHKLPDETEKAYVLTDASILLLKDNPFSVTPFLLAMLDPILTKPWYQLANWFQNDNPTPFNTAHGKTFWEYAGVEPKLNHLFNEAMASDARLVTSVVIDKCKGVFNGLDSLVDVGGGTRTAAKAIAKAFLEIQCTVFDLPHVVDGLQGSGNLKFVRGDMFEAIPPSDGIRLKWILNSWNDEECVKILKKSKEAITSKGKEGKVIIIDMVMENSKGDIDDESVETQLFFDMLMMVVVTGKERNEKEWAQLISSAGFSDYKITHVLGLRSLIEVFP 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01398 360 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 360 IPR016461 GO:0008168
Accr13g01398 360 PANTHER O-METHYLTRANSFERASE 18 345 IPR016461 GO:0008168
Accr13g01398 360 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 112 358 IPR029063 -
Accr13g01398 360 PIRSF O-mtase 1 360 IPR016461 GO:0008168
Accr13g01398 360 Gene3D - 3 107 IPR036388 -
Accr13g01398 360 FunFam Coniferyl alcohol 9-O-methyltransferase 4 107 - -
Accr13g01398 360 FunFam O-methyltransferase ZRP4 109 360 - -
Accr13g01398 360 SUPERFAMILY "Winged helix" DNA-binding domain 13 112 IPR036390 -
Accr13g01398 360 Gene3D Vaccinia Virus protein VP39 108 360 IPR029063 -
Accr13g01398 360 Pfam O-methyltransferase domain 131 342 IPR001077 GO:0008171
Accr13g01398 360 Pfam Dimerisation domain 33 79 IPR012967 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01398 Accr-Chr13 21234682 21285898 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01398 32 346 Monolignol Biosynthesis Gene Families AT5G54160 33.437 5.12e-51 172
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01398 - K16040 gmx:100807238 525.398