Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01392 ATGGGAAGCCGGATCCGAGTCGTCTCAACCAGCAATGTGCGAGCAGCGGCGACTCGAAGCGGCGATAATCCGGCTCGAGAGATCGAGTTGACTCCCTGGGATCTCCAGCTCTTACTAGTGGACCCCATCCAGAAAGGGCTTCTTTTCCACAACCCCAAAGCTAACATGGATTCGGTCATCCACCACCTCAAAGCCTCTCTTTCATCCACCCTCGATTTCTTCCCACCCCTCGCCGGCCGTCTTACCGTCGTCGAACACGACGACGAAACCTCCTCCGTCTTTGTGCTCTGCAACAACTCCGGAGCATTATTTGTCTACGCCGTAGCAGATGATTTATCCATCACAGATACCCTTCAACCCATCTACACACCTCGCTTCGTCCATTCGTTCTTCCCGCTTAACGGAGTTAAAAACCACGAAGGTACGAGCAAGCCACTGCTTGGCGTGCAAGTCACCGAGCTTCGAGACGGCATTTTCATCGGCTGCACTATCAACCACGTGGTTGGCGACGGCACGTCGTTTTGGCATTTCTTCAATTCCTGGTCTGAAATCTCACGTGGTTCGACCGAGTTATCCAAACCTCCCACGCTGGAGCGCTGGTTTCTAGACGGTATTAATCGGCCTCTACGTATTAGTCTGTCCAAGGCGACGAAGGAGAAGCAGAAGTTGGGTGGGTACCTCAAGTCGCAGCTGCAGCAAGAGAGGGTTTTTCATTTCACAAGAGACAAAATAGCAGAACTCAAATCAAAAGCCAACAAGATGGTATGTTCCGATAAGATATCTTCTCTGCAAGCAACTTTGACACATCTCTGGCGTGCCATAGTTCGGAACCAAGGTACTTGCCCACAACAAGAGGTCCACTACAGATTACTGATAGGTGTAAGGCCGAGGATGCGTCCGCCATTGCCTCAGAATTATTTTGGAAACGCGGTGCAGGATGGTACAGTGAGCTTGAAAGCAGAGGAACTGTTAGCCCGAGAGGGACTCGGTAAGGCTGCTCTGGAGATGAACAGGATGGTTGGTCTGGACGCAGAAGAGAGGCTCGTGAGCCACGTCAAGTCTTGGTTCAAAAACCCTAGGCTGCTTACAGAGGATGGCATGGCTGGGAATGCTTTGGTTACGAGTAGTTCCCCGAGGTTTGATGTGTACGGTAATGACTTTGGGTGGGGAAGGCCCGTGGCCGTCCGGAGCGGCGCCGGGAACAAGACGTACGGGAAAATTACTGTTTTTGCCGGAGCAGAGAACGGTAGCATTGACGTGGAAGTTTGCCTTCCTTATGAAACTTTGGAGGCTATGGCAAAGGACACAGAGTTTATGGATGCTGTTTCCGTTGCTTCCTATGATTGA 1347 0.516 MGSRIRVVSTSNVRAAATRSGDNPAREIELTPWDLQLLLVDPIQKGLLFHNPKANMDSVIHHLKASLSSTLDFFPPLAGRLTVVEHDDETSSVFVLCNNSGALFVYAVADDLSITDTLQPIYTPRFVHSFFPLNGVKNHEGTSKPLLGVQVTELRDGIFIGCTINHVVGDGTSFWHFFNSWSEISRGSTELSKPPTLERWFLDGINRPLRISLSKATKEKQKLGGYLKSQLQQERVFHFTRDKIAELKSKANKMVCSDKISSLQATLTHLWRAIVRNQGTCPQQEVHYRLLIGVRPRMRPPLPQNYFGNAVQDGTVSLKAEELLAREGLGKAALEMNRMVGLDAEERLVSHVKSWFKNPRLLTEDGMAGNALVTSSSPRFDVYGNDFGWGRPVAVRSGAGNKTYGKITVFAGAENGSIDVEVCLPYETLEAMAKDTEFMDAVSVASYD 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01392 448 Pfam Transferase family 23 439 - -
Accr13g01392 448 Gene3D - 232 438 IPR023213 -
Accr13g01392 448 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 8 439 - -
Accr13g01392 448 Gene3D - 5 224 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01392 Accr-Chr13 20985948 20987294 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01392 63 434 Monolignol Biosynthesis Gene Families AT5G48930 29.534 2.31e-30 120
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01392 - - qsu:111994143 532.717