Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01381 ATGAGCTCGGACACTGTAGGCAATGTTCTAACAAAAAGTAGTAATCCAGTTGATTCAACTCCAGATAAATCAGCTTCAGAATTTCTGAAATCCAGTCATAGTTCACCAGTCCCAGTTTTGGATAGTAATAATCCTGACCTGGAGAGTTCCCAGCAAATTAATGTGAGTGGATGCAATGCAGCATTGGTGGAAGCTCAGCCTTCAATTGTTGCAGCATCTGAGGTCAATTGTCATTGGTCTACCAATTTTCCAAAAACAGCTAATGGGGCAGATCCTGTTGGTTTTGATGTGGGTCTAGTAGTTGACACTGTTCTTGAGACCGACCTCCATAATGCTAACTCAACCATTATTGAGAATGAAGAACGTTCTGAATACCGGGAAGGTGAAGGTCCATTTCTTGATGGCAAGAAAAGCTTAGAACCTGTTGATTCCTCGTTGCAAGTTGGTCCTGATGTGGAATCCCAAAGTGCTTCAGATTGTAAGGTTTCAATGATGGAGACAAGTCATTCAAATTCTAACCTTGAGAGAGCAAGAGAGGTAGAGTCTGCTGAAGTTGAATTGGATCCTTTCAGAGACACCCTCCCTGATCCTGGTTGTAGGAATGCTCGCAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGACTAGGGACTTCAGCAGTTGTTGCCTCTGCTTCATCTAATGATATGCTTGGGACAATCAATACATCAAGTGATACTAATAATTCATGCTCAAGAGTGCCATTGCCTGGGGACAAAAGAAGTTTGGCAACGGTACTCTCTTCTAGATCAGAGCCTTCTACTTCCATGCTTTCAGAGGTTGCTGTTCACAATGAGCCTAGAGATTGGCCTTCTAACAGTGAAAAGCCAGCGGGAGAGACTACAGACATATTTTCTGTGTTGGAGACTTTCAGCCTTGATGATTTTCTCACACAAGATGGCTCTAGTGCAGGAAATCCAACTCTCCATTCTTTCCATGAGAAGGGAACAGAGGATTTTGTCACCCAGGCATGTGATATATCCCAAATGCAAAAGTTTCCTAATTATACAACCACTCACAATTCATTGACCTTCAAGGAAGATGCAGTCCTCAATGAGGATGATTCTCACACTGAGAATGGAAGGTTGGGAGCAGAGGAATTAGGAGGATCAATGCCTGCCCATCCTCTTGATGATACCCTTGATTATTCATCTATGAATAATGGCTCAGATCCAACTTTTCCAGTGTGTGAAGAACCACTTGAAGAACCGACAAGTACAGCAAACAATCCTACTTATGATGACCTTTTGCATGTAGAAGATATTCCTGAAGGAAAAGATGATGGTGGCTATGAAGAAAAAGATGCCACGATGTCCAGTTCTCCAAAAAATTGTACAGATTCTTCTGTAGTAGGTGAGACAGATAAAGTTGATAAACCTCGGAGGCAGGGGAGAAAGCGGGTTAATCTTAAACATGTCGATCCAGCAGAGAATGAGGATCCTGAGGAGGAGGATGAGCTTGACCTTACTTACTCTAACATTGATGAACTTGAAGAACTCGATGATGAATATGGTTTGAATAATGGATGCATGAAGAAAAAGAAGAAATCTGTATCAAAAATTGCAAAACCACGTCAAAAGCGTAAAAGGGCCAATGAGGATTTAGAAAAGGCTACTAAAGAACCTCGTAAAAAATTCTCTCATTCAACCCAACGAAGAAAAAGATGTGTGGATAAGGCTTTGCTGGAAATTCCTGAGGATGAACTTAATCCTCAAACCTTGCGTATCAAGGATATTATACTGCTTGCAGAGTATAGGGAGCGACAAGTGAAAAAGGAGGCAGCAGCATCCAAAACATCTTCGATTAACGGAAGAGATGGAGACTCACTTCACAAGGATTCTGCTCATAATGAAGATATGTTAGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCTAATGAAAACGTTCCATTAGCTCCCACTTTATTCAATTATCAGTCTTTCATGGACAGAAAACCTAGAGGAAAATGGTCGAAACAAGACACTGAACTGTTCTTTGGGGCTGTTCGCCAGTTTGGCACAGATTTTTCTATGATACAACAACTTTTCCCCGATCGAACACGTCATCAAATTAAGTTGAAGTACAAACAGGAAGAACGTCAACATCCTTTACTCCTATCTGATGCTATAAATAACCGCCCAAAAGATCTTTCACATTTTAAAATGGTTTTTGAGCTGCTGCAACAAGCTTCTGCTAAGACAGAACAAGACATTAGTGACACCTCAGTTGGCATGACAGAGGAATCGGTGGACTTGACATCCGATCCTAATCCTAATGAAGGGAAAGATGCAAAACCTGACCAGGACGAAGCTGTGCAAGATCATCAGGAAGATAATGAGCCATCTCATAGTGCTGAAAAATCTAACGAAAATGAAGATGAAGATGAAGATGATGACGACGATGACTTCCAAAGATGGTGTCAATATAAGAGCGATTATTAG 2484 0.4134 MSSDTVGNVLTKSSNPVDSTPDKSASEFLKSSHSSPVPVLDSNNPDLESSQQINVSGCNAALVEAQPSIVAASEVNCHWSTNFPKTANGADPVGFDVGLVVDTVLETDLHNANSTIIENEERSEYREGEGPFLDGKKSLEPVDSSLQVGPDVESQSASDCKVSMMETSHSNSNLERAREVESAEVELDPFRDTLPDPGCRNARKFQPKIKPRPRLGTSAVVASASSNDMLGTINTSSDTNNSCSRVPLPGDKRSLATVLSSRSEPSTSMLSEVAVHNEPRDWPSNSEKPAGETTDIFSVLETFSLDDFLTQDGSSAGNPTLHSFHEKGTEDFVTQACDISQMQKFPNYTTTHNSLTFKEDAVLNEDDSHTENGRLGAEELGGSMPAHPLDDTLDYSSMNNGSDPTFPVCEEPLEEPTSTANNPTYDDLLHVEDIPEGKDDGGYEEKDATMSSSPKNCTDSSVVGETDKVDKPRRQGRKRVNLKHVDPAENEDPEEEDELDLTYSNIDELEELDDEYGLNNGCMKKKKKSVSKIAKPRQKRKRANEDLEKATKEPRKKFSHSTQRRKRCVDKALLEIPEDELNPQTLRIKDIILLAEYRERQVKKEAAASKTSSINGRDGDSLHKDSAHNEDMLGSEYGRGSDDDQANENVPLAPTLFNYQSFMDRKPRGKWSKQDTELFFGAVRQFGTDFSMIQQLFPDRTRHQIKLKYKQEERQHPLLLSDAINNRPKDLSHFKMVFELLQQASAKTEQDISDTSVGMTEESVDLTSDPNPNEGKDAKPDQDEAVQDHQEDNEPSHSAEKSNENEDEDEDDDDDDFQRWCQYKSDY 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01381 827 ProSiteProfiles SANT domain profile. 666 717 IPR017884 -
Accr13g01381 827 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 201 827 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 412 498 - -
Accr13g01381 827 CDD SANT 670 711 IPR001005 -
Accr13g01381 827 MobiDBLite consensus disorder prediction 539 557 - -
Accr13g01381 827 Pfam Myb DNA-binding like 661 744 IPR039467 -
Accr13g01381 827 Coils Coil 533 553 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 429 446 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 604 646 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 747 827 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 231 291 - -
Accr13g01381 827 SMART sant 667 715 IPR001005 -
Accr13g01381 827 MobiDBLite consensus disorder prediction 449 463 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 772 803 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 617 643 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 1 50 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 231 247 - -
Accr13g01381 827 SUPERFAMILY Homeodomain-like 669 717 IPR009057 -
Accr13g01381 827 Gene3D - 671 731 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 527 564 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 256 273 - -
Accr13g01381 827 MobiDBLite consensus disorder prediction 747 770 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01381 Accr-Chr13 20670357 20676901 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr13g01381 Myb_DNA-bind_7 9.6e-28 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01381 K15198 - gmx:100792788 557.37