Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01380 ATGGATCCGTTTGATGATTTTTTATCAGAAGCTCCTGTTTCACGTGCTAGGGTGGGTGGCAGGTTTATTCCAAAGGCCAAAGCTAAACAGCCGGCTCCAAAGGAGATATCCACATCAAATCAAGCAACCTCATCTAATGATGGAAAGAATGAGCAAGTTGTTTCATCATCCATGAGCTCGGACACTGTAGGCAATGTTCTAACAAAAAGTAGTAATCCAGTTGATTCAACTCCAGATAAATCAGCTTCAGAATTTCTGAAATCCAGTCATAGTTCACCAGTCCCAGTTTTGGATAGTAATAATCCTGACCTGGAGAGTTCCCAGCAAATTAATGTGAGTGGATGCAATGCAGCATTGGTGGAAGCTCAGCCTTCAATTGTTGCAGCATCTGAGGTCAATTGTCATTGGTCTACCAATTTTCCAAAAACAGCTAATGGGGCAGATCCTGTTGGTTTTGATGTGGGTCTAGTAGTTGACACTGTTCTTGAGACCGACCTCCATAATGCTAACTCAACCATTATTGAGAATGAAGAACGTTCTGAATACCGGGAAGGTGAAGGTCCATTTCTTGATGGCAAGAAAAGCTTAGAACCTGTTGATTCCTCGTTGCAAGTTGGTCCTGATGTGGAATCCCAAAGTGCTTCAGATTGTAAGGTTTCAATGATGGAGACAAGTCATTCAAATTCTAACCTTGAGAGAGCAAGAGAGGTAGAGTCTGCTGAAGTTGAATTGGATCCTTTCAGAGACACCCTCCCTGATCCTGGTTGTAGGAATGCTCGCAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGACTAGGGACTTCAGCAGTTGTTGCCTCTGCTTCATCTAATGATATGCTTGGGACAATCAATACATCAAGTGATACTAATAATTCATGCTCAAGAGTGCCATTGCCTGGGGACAAAAGAAGTTTGGCAACGGTACTCTCTTCTAGATCAGAGCCTTCTACTTCCATGCTTTCAGAGGTTGCTGTTCACAATGAGCCTAGAGATTGGCCTTCTAACAGTGAAAAGCCAGCGGGAGAGACTACAGACATATTTTCTGTGTTGGAGACTTTCAGCCTTGATGATTTTCTCACACAAGATGGCTCTAGTGCAGGAAATCCAACTCTCCATTCTTTCCATGAGAAGGGAACAGAGGATTTTGTCACCCAGGCATGTGATATATCCCAAATGCAAAAGTTTCCTAATTATACAACCACTCACAATTCATTGACCTTCAAGGAAGATGCAGTCCTCAATGAGGATGATTCTCACACTGAGAATGGAAGGTTGGGAGCAGAGGAATTAGGAGGATCAATGCCTGCCCATCCTCTTGATGATACCCTTGATTATTCATCTATGAATAATGGCTCAGATCCAACTTTTCCAGTGTGTGAAGAACCACTTGAAGAACCGACAAGTACAGCAAACAATCCTACTTATGATGACCTTTTGCATGTAGAAGATATTCCTGAAGGAAAAGATGATGGTGGCTATGAAGAAAAAGATGCCACGATGTCCAGTTCTCCAAAAAATTGTACAGATTCTTCTGTAGTAGGTGAGACAGATAAAGTTGATAAACCTCGGAGGCAGGGGAGAAAGCGGGTTAATCTTAAACATGTCGATCCAGCAGAGAATGAGGATCCTGAGGAGGAGGATGAGCTTGACCTTACTTACTCTAACATTGATGAACTTGAAGAACTCGATGATGAATATGGTTTGAATAATGGATGCATGAAGAAAAAGAAGAAATCTGTATCAAAAATTGCAAAACCACGTCAAAAGCGTAAAAGGGCCAATGAGGATTTAGAAAAGGCTACTAAAGAACCTCGTAAAAAATTCTCTCATTCAACCCAACGAAGAAAAAGATGTGTGGATAAGGCTTTGCTGGAAATTCCTGAGGATGAACTTAATCCTCAAACCTTGCGTATCAAGGATATTATACTGCTTGCAGAGTATAGGGAGCGACAAGTGAAAAAGGAGGCAGCAGCATCCAAAACATCTTCGATTAACGGAAGAGATGGAGACTCACTTCACAAGGATTCTGCTCATAATGAAGATATGTTAGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCTAATGAAAACGTTCCATTAGCTCCCACTTTATTCAATTATCAGTCTTTCATGGACAGAAAACCTAGAGGAAAATGGTCGAAACAAGACACTGAACTGTTCTTTGGGGCTGTTCGCCAGTTTGGCACAGATTTTTCTATGATACAACAACTTTTCCCCGATCGAACACGTCATCAAATTAAGTTGAAGTACAAACAGGAAGAACGTCAACATCCTTTACTCCTATCTGATGCTATAAATAACCGCCCAAAAGATCTTTCACATTTTAAAATGGTTTTTGAGCTGCTGCAACAAGCTTCTGCTAAGACAGAACAAGACATTAGTGACACCTCAGTTGGCATGACAGAGGAATCGGTGGACTTGACATCCGATCCTAATCCTAATGAAGGGAAAGATGCAAAACCTGACCAGGACGAAGCTGTGCAAGATCATCAGGAAGATAATGAGCCATCTCATAGTGCTGAAAAATCTAACGAAAATGAAGATGAAGATGAAGATGATGACGACGATGACTTCCAAAGATGGTGTCAATATAAGAGCGATTATTAG 2655 0.4147 MDPFDDFLSEAPVSRARVGGRFIPKAKAKQPAPKEISTSNQATSSNDGKNEQVVSSSMSSDTVGNVLTKSSNPVDSTPDKSASEFLKSSHSSPVPVLDSNNPDLESSQQINVSGCNAALVEAQPSIVAASEVNCHWSTNFPKTANGADPVGFDVGLVVDTVLETDLHNANSTIIENEERSEYREGEGPFLDGKKSLEPVDSSLQVGPDVESQSASDCKVSMMETSHSNSNLERAREVESAEVELDPFRDTLPDPGCRNARKFQPKIKPRPRLGTSAVVASASSNDMLGTINTSSDTNNSCSRVPLPGDKRSLATVLSSRSEPSTSMLSEVAVHNEPRDWPSNSEKPAGETTDIFSVLETFSLDDFLTQDGSSAGNPTLHSFHEKGTEDFVTQACDISQMQKFPNYTTTHNSLTFKEDAVLNEDDSHTENGRLGAEELGGSMPAHPLDDTLDYSSMNNGSDPTFPVCEEPLEEPTSTANNPTYDDLLHVEDIPEGKDDGGYEEKDATMSSSPKNCTDSSVVGETDKVDKPRRQGRKRVNLKHVDPAENEDPEEEDELDLTYSNIDELEELDDEYGLNNGCMKKKKKSVSKIAKPRQKRKRANEDLEKATKEPRKKFSHSTQRRKRCVDKALLEIPEDELNPQTLRIKDIILLAEYRERQVKKEAAASKTSSINGRDGDSLHKDSAHNEDMLGSEYGRGSDDDQANENVPLAPTLFNYQSFMDRKPRGKWSKQDTELFFGAVRQFGTDFSMIQQLFPDRTRHQIKLKYKQEERQHPLLLSDAINNRPKDLSHFKMVFELLQQASAKTEQDISDTSVGMTEESVDLTSDPNPNEGKDAKPDQDEAVQDHQEDNEPSHSAEKSNENEDEDEDDDDDDFQRWCQYKSDY 884
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01380 884 Pfam Myb DNA-binding like 718 801 IPR039467 -
Accr13g01380 884 MobiDBLite consensus disorder prediction 1 106 - -
Accr13g01380 884 SMART sant 724 772 IPR001005 -
Accr13g01380 884 MobiDBLite consensus disorder prediction 223 348 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 804 827 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 829 860 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 33 106 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 661 703 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 313 330 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 229 250 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 276 304 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 674 700 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 469 555 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 506 520 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 584 621 - -
Accr13g01380 884 Coils Coil 590 610 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 596 614 - -
Accr13g01380 884 MobiDBLite consensus disorder prediction 804 884 - -
Accr13g01380 884 ProSiteProfiles SANT domain profile. 723 774 IPR017884 -
Accr13g01380 884 MobiDBLite consensus disorder prediction 486 503 - -
Accr13g01380 884 CDD SANT 727 768 IPR001005 -
Accr13g01380 884 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 884 - -
Accr13g01380 884 SUPERFAMILY Homeodomain-like 726 774 IPR009057 -
Accr13g01380 884 Gene3D - 728 788 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01380 Accr-Chr13 20670357 20677155 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr13g01380 Myb_DNA-bind_7 1.1e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01380 K15198 - gmx:100792788 590.497