Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01379 ATGGATCCGTTTGATGATTTTTTATCAGAAGCTCCTGTTTCACGTGCTAGGGTGGGTGGCAGGTTTATTCCAAAGGCCAAAGCTAAACAGCCGGCTCCAAAGGAGATATCCACATCAAATCAAGCAACCTCATCTAATGATGGAAAGAATGAGCAAGTTGTTTCATCATCCATGAGCTCGGACACTGTAGGCAATGTTCTAACAAAAAGTAGTAATCCAGTTGATTCAACTCCAGATAAATCAGCTTCAGAATTTCTGAAATCCAGTCATAGTTCACCAGTCCCAGTTTTGGATAGTAATAATCCTGACCTGGAGAGTTCCCAGCAAATTAATGTGAGTGGATGCAATGCAGCATTGGTGGAAGCTCAGCCTTCAATTGTTGCAGCATCTGAGGCAGATCCTGTTGGTTTTGATGTGGGTCTAGTAGTTGACACTGTTCTTGAGACCGACCTCCATAATGCTAACTCAACCATTATTGAGAATGAAGAACGTTCTGAATACCGGGAAGGTGAAGGTCCATTTCTTGATGGCAAGAAAAGCTTAGAACCTGTTGATTCCTCGTTGCAAGTTGGTCCTGATGTGGAATCCCAAAGTGCTTCAGATTGTAAGGTTTCAATGATGGAGACAAGTCATTCAAATTCTAACCTTGAGAGAGCAAGAGAGGTAGAGTCTGCTGAAGTTGAATTGGATCCTTTCAGAGACACCCTCCCTGATCCTGGTTGTAGGAATGCTCGCAAGTTTCAACCTAAGATTAAGCCTCGGCCTAGACTAGGGACTTCAGCAGTTGTTGCCTCTGCTTCATCTAATGATATGCTTGGGACAATCAATACATCAAGTGATACTAATAATTCATGCTCAAGAGTGCCATTGCCTGGGGACAAAAGAAGTTTGGCAACGGTACTCTCTTCTAGATCAGAGCCTTCTACTTCCATGCTTTCAGAGGTTGCTGTTCACAATGAGCCTAGAGATTGGCCTTCTAACAGTGAAAAGCCAGCGGGAGAGACTACAGACATATTTTCTGTGTTGGAGACTTTCAGCCTTGATGATTTTCTCACACAAGATGGCTCTAGTGCAGGAAATCCAACTCTCCATTCTTTCCATGAGAAGGGAACAGAGGATTTTGTCACCCAGGCATGTGATATATCCCAAATGCAAAAGTTTCCTAATTATACAACCACTCACAATTCATTGACCTTCAAGGAAGATGCAGTCCTCAATGAGGATGATTCTCACACTGAGAATGGAAGGTTGGGAGCAGAGGAATTAGGAGGATCAATGCCTGCCCATCCTCTTGATGATACCCTTGATTATTCATCTATGAATAATGGCTCAGATCCAACTTTTCCAGTGTGTGAAGAACCACTTGAAGAACCGACAAGTACAGCAAACAATCCTACTTATGATGACCTTTTGCATGTAGAAGATATTCCTGAAGGAAAAGATGATGGTGGCTATGAAGAAAAAGATGCCACGATGTCCAGTTCTCCAAAAAATTGTACAGATTCTTCTGTAGTAGGTGAGACAGATAAAGTTGATAAACCTCGGAGGCAGGGGAGAAAGCGGGTTAATCTTAAACATGTCGATCCAGCAGAGAATGAGGATCCTGAGGAGGAGGATGAGCTTGACCTTACTTACTCTAACATTGATGAACTTGAAGAACTCGATGATGAATATGGTTTGAATAATGGATGCATGAAGAAAAAGAAGAAATCTGTATCAAAAATTGCAAAACCACGTCAAAAGCGTAAAAGGGCCAATGAGGATTTAGAAAAGGCTACTAAAGAACCTCGTAAAAAATTCTCTCATTCAACCCAACGAAGAAAAAGATGTGTGGATAAGGCTTTGCTGGAAATTCCTGAGGATGAACTTAATCCTCAAACCTTGCGTATCAAGGATATTATACTGCTTGCAGAGTATAGGGAGCGACAAGTGAAAAAGGAGGCAGCAGCATCCAAAACATCTTCGATTAACGGAAGAGATGGAGACTCACTTCACAAGGATTCTGCTCATAATGAAGATATGTTAGGTTCAGAATATGGAAGAGGCTCAGATGATGATCAAGCTAATGAAAACGTTCCATTAGCTCCCACTTTATTCAATTATCAGTCTTTCATGGACAGAAAACCTAGAGGAAAATGGTCGAAACAAGACACTGAACTGTTCTTTGGGGCTGTTCGCCAGTTTGGCACAGATTTTTCTATGATACAACAACTTTTCCCCGATCGAACACGTCATCAAATTAAGTTGAAGTACAAACAGGAAGAACGTCAACATCCTTTACTCCTATCTGATGCTATAAATAACCGCCCAAAAGATCTTTCACATTTTAAAATGGTTTTTGAGCTGCTGCAACAAGCTTCTGCTAAGACAGAACAAGACATTAGTGACACCTCAGTTGGCATGACAGAGGAATCGGTGGACTTGACATCCGATCCTAATCCTAATGAAGGGAAAGATGCAAAACCTGACCAGGACGAAGCTGTGCAAGATCATCAGGAAGATAATGAGCCATCTCATAGTGCTGAAAAATCTAACGAAAATGAAGATGAAGATGAAGATGATGACGACGATGACTTCCAAAGATGGTGTCAATATAAGAGCGATTATTAG 2610 0.4153 MDPFDDFLSEAPVSRARVGGRFIPKAKAKQPAPKEISTSNQATSSNDGKNEQVVSSSMSSDTVGNVLTKSSNPVDSTPDKSASEFLKSSHSSPVPVLDSNNPDLESSQQINVSGCNAALVEAQPSIVAASEADPVGFDVGLVVDTVLETDLHNANSTIIENEERSEYREGEGPFLDGKKSLEPVDSSLQVGPDVESQSASDCKVSMMETSHSNSNLERAREVESAEVELDPFRDTLPDPGCRNARKFQPKIKPRPRLGTSAVVASASSNDMLGTINTSSDTNNSCSRVPLPGDKRSLATVLSSRSEPSTSMLSEVAVHNEPRDWPSNSEKPAGETTDIFSVLETFSLDDFLTQDGSSAGNPTLHSFHEKGTEDFVTQACDISQMQKFPNYTTTHNSLTFKEDAVLNEDDSHTENGRLGAEELGGSMPAHPLDDTLDYSSMNNGSDPTFPVCEEPLEEPTSTANNPTYDDLLHVEDIPEGKDDGGYEEKDATMSSSPKNCTDSSVVGETDKVDKPRRQGRKRVNLKHVDPAENEDPEEEDELDLTYSNIDELEELDDEYGLNNGCMKKKKKSVSKIAKPRQKRKRANEDLEKATKEPRKKFSHSTQRRKRCVDKALLEIPEDELNPQTLRIKDIILLAEYRERQVKKEAAASKTSSINGRDGDSLHKDSAHNEDMLGSEYGRGSDDDQANENVPLAPTLFNYQSFMDRKPRGKWSKQDTELFFGAVRQFGTDFSMIQQLFPDRTRHQIKLKYKQEERQHPLLLSDAINNRPKDLSHFKMVFELLQQASAKTEQDISDTSVGMTEESVDLTSDPNPNEGKDAKPDQDEAVQDHQEDNEPSHSAEKSNENEDEDEDDDDDDFQRWCQYKSDY 869
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01379 869 MobiDBLite consensus disorder prediction 646 688 - -
Accr13g01379 869 SMART sant 709 757 IPR001005 -
Accr13g01379 869 Pfam Myb DNA-binding like 703 786 IPR039467 -
Accr13g01379 869 MobiDBLite consensus disorder prediction 789 812 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 491 505 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 814 845 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 569 606 - -
Accr13g01379 869 PANTHER RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B 17 869 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 298 315 - -
Accr13g01379 869 CDD SANT 712 753 IPR001005 -
Accr13g01379 869 MobiDBLite consensus disorder prediction 1 107 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 471 488 - -
Accr13g01379 869 SUPERFAMILY Homeodomain-like 711 759 IPR009057 -
Accr13g01379 869 Gene3D - 713 773 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 789 869 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 214 235 - -
Accr13g01379 869 ProSiteProfiles SANT domain profile. 708 759 IPR017884 -
Accr13g01379 869 MobiDBLite consensus disorder prediction 273 333 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 206 247 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 273 289 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 659 685 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 581 599 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 33 107 - -
Accr13g01379 869 MobiDBLite consensus disorder prediction 454 540 - -
Accr13g01379 869 Coils Coil 575 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01379 Accr-Chr13 20670357 20677155 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Accr13g01379 Myb_DNA-bind_7 1e-27 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01379 K15198 - gmx:100792788 580.482