Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01378 ATGGCCTACATGTGTGCTGACAGCGGCAATCTCATGGCGATTGCTCAACAGGTCATCAAGCAAAAGGAACAACAAGAACAACAACAGCAGCAGCATCAGCATCAGAACCACCACCCCCATCATCAGCAGCAGAATCATCAGCAACAGCAACTTCTGGGGATTCATTCAATCGCTCTTCATCCATGGACGAACACTCCTCCTCTGGGTTTTGGCCTCACCGGAGCTGATTTCTCCGACCCCTTTCAGGTTGGGTCTGGCCCTGACGCATCGGAGTCTGGTTTTCAATTTCCTCATCTGGACCCTCACCACTCTACTGGGTTTAGATTTTCTGATTTCGCTGCTGATGCTGGTGGCGGCGCGTGCGGCGCTGCCGGTGAGTTTGATTCTGACGAGTGGATGGATAGCTTGATAGGCGGTGCTGGTGGTACTGGTGACTCAACGGATAGTTCCAATCTGCCTTCTGCGTGCGACGCGTGGCAGAACAATGCCGATTTCGGTCTTTACGCCTCTAACCCCTTCGCCACCTGCCCTACCCGACTCTCGCCTCCGTCGGACCTCAATCGGGTCATTTTCTCGTCCGAGGCCGCCACGTTTACCTCCCCTCTACCGCCATCTTCACCGACCTTAGTTAAAGAACCTGCTGCTCCTAAACCAGCACCAGCTTCGTCGCCACTGGCGGAGCCCGTCGTACGCCGAAACGACAGTGGCCATGGCGTTTTGTCTAGCGTTGCAGAAACCAGTGAGTCCACACATCCACTTCTGAAAGCTCTTATTGACTGTGCTGGACTGGCCGAGACCGAACCAGATCAGGCTGAAGAATCTCTTGTTCAGCTCAGCAAGACGGCGTCGCAGCATGGAGATCCTACACAGAGAGTGGCCTTTTTCTTCTGCGAAGCTTTACGCAGCAAAATAAAGCCAGAAATGGTGGAGACTTCTGGATGTACTACTTCAGAGGAAGAGTTAACACTCTCGTACAAAGCTCTGAACGATGCCTGTCCTTATTCAAAATTTGCTCATCTAACAGCGAATCAAGCTATACTGGAAGCTACTGAAGGAGCCTCAAAGATTCACATAGTGGATTTTGGGATTGTTCAAGGTGTTCAATGGGCGGCTCTCTTACAAGCATTCGCTACTCGATCTTCAGGGAAGCCTACAAGCATTCGCATTTCTGGAATTCCTGCTATTTCTCTGGGAACATCTCCTCGTGCTTCTTTGCTTGCCACAGGGAATCGTCTCTCTGAATTCGCGAAGCTTCTGGACTTGAACTTCGAGTTCGAACCTATTCTGACTCCAATTCATCAGCTGAACCAATCCAGCTTCGCTACTGATCCTGATGAGGCCTTGGCTGTGAACTTCATGCTTCAATTATATAATCTGTTGGATGAGAGTAACGTTGCGGTGGAGACTGCACTCCGATTGGCTAAATCTTTGAAACCTAAAATCGTTACTCTTGGAGAGTATGAAGCTAGCTTGACCAGGGTTGGATTCCTGAACCGGTTCAAGACTGCGTTGAAGTACTTCACGGCGATGTTTGAGTCTTTGGAGCCGAATTTGCTGCGAGACTCGCCTGATAGGCTGCAAGTGGAGAGACTTCTGCTCGGCCGGAGTATCTCCGGCGTGGTTGGATCAAGGTCACAGGGGAATGTAAGAGAGCACATGGAAGATAAAGATCAGTGGAGAGTTTTGATGGAAGGTGCTGGTTTTGAATCTGTAAACCTCAGCCATTATGCAATTAGTCAAGCTAAGATTCTTCTGTGGAATTACAATAGTTCTCTGTATTCATTGGTGGAATCTGAACCTGGGTTTTTGACTCTGGCTTGGAATGAGGTCCCTCTTCTGACTGTTTCTTCTTGGCGTTAA 1860 0.4968 MAYMCADSGNLMAIAQQVIKQKEQQEQQQQQHQHQNHHPHHQQQNHQQQQLLGIHSIALHPWTNTPPLGFGLTGADFSDPFQVGSGPDASESGFQFPHLDPHHSTGFRFSDFAADAGGGACGAAGEFDSDEWMDSLIGGAGGTGDSTDSSNLPSACDAWQNNADFGLYASNPFATCPTRLSPPSDLNRVIFSSEAATFTSPLPPSSPTLVKEPAAPKPAPASSPLAEPVVRRNDSGHGVLSSVAETSESTHPLLKALIDCAGLAETEPDQAEESLVQLSKTASQHGDPTQRVAFFFCEALRSKIKPEMVETSGCTTSEEELTLSYKALNDACPYSKFAHLTANQAILEATEGASKIHIVDFGIVQGVQWAALLQAFATRSSGKPTSIRISGIPAISLGTSPRASLLATGNRLSEFAKLLDLNFEFEPILTPIHQLNQSSFATDPDEALAVNFMLQLYNLLDESNVAVETALRLAKSLKPKIVTLGEYEASLTRVGFLNRFKTALKYFTAMFESLEPNLLRDSPDRLQVERLLLGRSISGVVGSRSQGNVREHMEDKDQWRVLMEGAGFESVNLSHYAISQAKILLWNYNSSLYSLVESEPGFLTLAWNEVPLLTVSSWR 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01378 619 ProSiteProfiles GRAS family profile. 244 619 IPR005202 -
Accr13g01378 619 Coils Coil 15 35 - -
Accr13g01378 619 SUPERFAMILY beta-sandwich domain of Sec23/24 16 212 - -
Accr13g01378 619 MobiDBLite consensus disorder prediction 19 50 - -
Accr13g01378 619 MobiDBLite consensus disorder prediction 200 228 - -
Accr13g01378 619 Pfam GRAS domain family 254 619 IPR005202 -
Accr13g01378 619 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 228 613 IPR005202 -
Accr13g01378 619 MobiDBLite consensus disorder prediction 206 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01378 Accr-Chr13 20626460 20628319 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01378 1 619 GRAS Transcription Factor Family AT5G66770 58.400 0.0 641
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Accr13g01378 GRAS 1.6e-106 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01378 - - qsa:O6P43_033716 754.207