LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Accr13g01366	ATGGTCGCGGTTGGTTTCTCCTCAGTCGTTCCCAGGTTGAAGAGAGAAGAATGTAAACGAACAAAACACGATTCCAACTTCTCTGATTGGAAGATTCTCATTGGCCCTTCAGATTGGGATGACTATTCTAGAGGGAAGGAAGACTCAGCTAGGTACAGAATTCATAACCTCCCAGAAAAATTGAGCCCAGGAGTTTATGAACTTGGTATTGCTGTATCTCGTATTGGTGTAGGGCGCATGGTTTACAAGCTTGACCCAGACCGTATAGTTGTGGTTTACCTTGGAAAAGCTGACAATGTGCGGACAAGACTCCAACAGTATGGCCGAACTGGAGCTCATTTGAGCAACAACTGTTTAACTTCTGATCCAGATGATAGTAATCCTGCTTGCACCCAAAAAGGGAAGGGATTTTTTGAGGAAATTTTTTCACAAGGCTATCCAATTATTTATAGATGGGCTCCTATGCAAAGCAAGGAAGATGCCAAGAAAACGGAAAGTCGATTGCTCAATGTATTTGATTATGCATGGAACACGAGCAATAATGGTACCCGGCGCCAAGATGATATTATTAAGAAGATTAATAAAGTTGCGTCAAGTCCTACAACAATTTCAAACATGGACAAGCTGCTTCAACCTTTCACCCGGAAGCGAGTGGGTATCCGAATCAAATCAAGCAGCATGCCTTCGCCAGATGGCAAATTACATGAAATAGACAGAGGCAGCTATAATTTCGTATCTCGAGTATTTAAATTTGGCAGATCGAATCCAAGGTTAGTCCAAGATGTCCCCAGTGTCATTCAGGACAATACTACAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTATCTGTACAAGACCACCAGCTGAAAGAAGAATGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGTCCACTTCTAAAAGGAGAATGAAATCAGAGAACAATCTAGACATAGAACTCAATGTGCCCTCAAATCCAAGGTTGCTTCAAGATGTCCCTGGTGTCATTCAGGACAATACTACAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTATCTGTACAAGACCACCGGCTGAAAGAAGAATGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGTCTACTTCTCAAAGGAGAATGAAATCGGAGAACAATCAAGACATAGAACTCAATGTGCCCTCAAATCCAAGGTTACTTCAAGATGTCCCTGGTGTCATTCAGGACAATACTACAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTATCTGTACAAGACCACCGGCTGAAAGAAGAATGAGGTGTTTTGAACACAAAGGAATGAGAATAAATGGGTCTACTTCTCAAAGGAGAATGAAATCAGAGAACAATCAAGACATAGAACTCAATGTGCCCTCAAATCCAAGGTTACTTCAAGATGTCCCTGGTGTCATTCAGGACAATACTAAAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTATCTGTACAAGACCACCGGCTGAAAGAAGAATGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGTCTACTTCTCAAAGGAGGATGAAATCGGAGAACAATCAAGACATTGAACTCAATGTGCCCTCAAATCTAAGGTTAGTTCAAGATGTCCCTGGTGTCATTCAGGACAAGGCTACAAGATTTTGTGGAGTGGTCTTGGGTGATGGTTCTATCTGTACAAGACCACCGGCTGAAAGAAGAGTGAGGTGTGTAGAACACAAAGGAATGAGAATAAATGGGTTCAACTTCTAA	1791	0.4193	MVAVGFSSVVPRLKREECKRTKHDSNFSDWKILIGPSDWDDYSRGKEDSARYRIHNLPEKLSPGVYELGIAVSRIGVGRMVYKLDPDRIVVVYLGKADNVRTRLQQYGRTGAHLSNNCLTSDPDDSNPACTQKGKGFFEEIFSQGYPIIYRWAPMQSKEDAKKTESRLLNVFDYAWNTSNNGTRRQDDIIKKINKVASSPTTISNMDKLLQPFTRKRVGIRIKSSSMPSPDGKLHEIDRGSYNFVSRVFKFGRSNPRLVQDVPSVIQDNTTRFCGVVLGDGSICTRPPAERRMRCVEHKGMRINGSTSKRRMKSENNLDIELNVPSNPRLLQDVPGVIQDNTTRFCGVVLGDGSICTRPPAERRMRCVEHKGMRINGSTSQRRMKSENNQDIELNVPSNPRLLQDVPGVIQDNTTRFCGVVLGDGSICTRPPAERRMRCFEHKGMRINGSTSQRRMKSENNQDIELNVPSNPRLLQDVPGVIQDNTKRFCGVVLGDGSICTRPPAERRMRCVEHKGMRINGSTSQRRMKSENNQDIELNVPSNLRLVQDVPGVIQDKATRFCGVVLGDGSICTRPPAERRVRCVEHKGMRINGFNF	596

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Accr13g01366	596	Pfam	GIY-YIG domain-containing protein	27	190	-	-
	Accr13g01366	596	PANTHER	PROTEIN EFFECTOR OF TRANSCRIPTION 2-RELATED	316	390	IPR038909	GO:0003677\|GO:0006355
	Accr13g01366	596	SMART	uri_9	74	182	IPR000305	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Accr13g01366	490	596	HRT Transcription Factor Family	AT5G56780	37.838	2.40e-12	67.4

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	HRT	Accr13g01366		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Accr13g01366	-		-	pcin:129292928	610.527