Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01349 ATGGTGCGACGTGCTTCACTGCAGGACGTGGATGATTCGACTGATCGCTGGGCCATTGTGGTTCGAGTGTTCCGTAAATGGAACGTTTACCAAAAGTCTGCCCCCGCGGAATTGTTTTGTGTTTCAATGGTCTTGATTGATGAGGAGGGTACGACCATCCAAGCAAGTGTGCTAAATAATAGGAACCTCCTTCATAAATTTCGCTTCTCCATTGTTGAAGGCCAAATTTACAAATTTGCAAACTTTGAGGTCACTCCAAATGTGAATCAGTATAGAGCATGTAGCCACGAATTCAAGATAACATTCACTCCTCGGACATCTTGTGCAGATACAATCGCTACAATTCCAACTTATGCCTACTCATTTTTCCCTATCCTAGAAATCATGAAAATTGATTTCCGTCATCCTGTGGATAAGCTTATTGATGTGGTGGCTTTTGTGAAGGATGTAGGCACATTGGATGAGTTCTGCAAAGGGAATGAGACGAAAAAAAGGCTACGTCTGAAACTGGCTGACTCTGAGAACAATGAAGTGGAGTGCACATTATTTGATAACTGTGCTTCGGATGCCTATATGGCATACTTGCAAAATACTGAAAGTCCTGTTGTAGTTTTATTAAACTTAGCAAGAGTTGGATTTTCTGAGGATGGTACACCACAAGTTTGTAGCTCCTTCAATGCTACTATGGCTTTATTTAACCCTTCTATCACAGAGGTTAAAAATTTGATACAAAGTGCAAAGGATGAAAAGTCCCCTGTCATGGTTGCACTCTCTCAACCCAAGACTTCACAGCCAAGTCAGCATTCGAATGGGGCTTCTTTACACAACCAGACCAAAGTCACTATCTCTCAAATACCTGAACAAGCAATTGGAGATTCATTTGTAATCCACTGTCAAATTCATAAACTTGAAACAAAACACGGTTGGATTTATGATGCATGCTCAAAGTGTGGGTCAAAGGTCAAAATAGATGATCCTTCATGGATTTGTCCCCTCTGCAAGAAAAAACCAGACTCAATTGAACCAAAGATGAAAATTCATTATCTTGTCAGAGACCAGACTGGATCAGCTTCTGTGATTTTCTGGGATAAACTTGCTGTTCCGTTGGTAAAGAAGACAGCATCTGAACTAATTAGTTCACTAAATGAGAAAAAAGAAAAGGATGACGATGACGACGACATTCCTAAAGAGTTAGACCTTCCGGTTGGAAAGAATCTTCTGCTCAAACTGAAGATGAATGAGTTCAACAAGAAGTATCCTACTTCTAGCATCAGTGTTGGCCAATACACCATATGCGAAGATCTTTCGAACCAGTTCAGTGAGGCAATTACAGAGAGTTCATTTGAAGGGTGTTCTGAAGTGAAGGCAACTGCAGAGAGTGTTGATGCTGAAAGTGTTACTCCACTTGTAACACCTCTTGATCATAGCACCATATCTGACCTTTCTCAACATGTCACCCCTGCTCCTATTAAGGGGAAAAGAAGGATAACCAACAAGAGAAATGTTGTTAAGGATGACATACCAACTACTTCTCTTCAGTCTTCTGCTGGTCCTGCTGAGGAAAGAGTGACAAAAGTGATAAAGCAAGAGAAGTAG 1596 0.4091 MVRRASLQDVDDSTDRWAIVVRVFRKWNVYQKSAPAELFCVSMVLIDEEGTTIQASVLNNRNLLHKFRFSIVEGQIYKFANFEVTPNVNQYRACSHEFKITFTPRTSCADTIATIPTYAYSFFPILEIMKIDFRHPVDKLIDVVAFVKDVGTLDEFCKGNETKKRLRLKLADSENNEVECTLFDNCASDAYMAYLQNTESPVVVLLNLARVGFSEDGTPQVCSSFNATMALFNPSITEVKNLIQSAKDEKSPVMVALSQPKTSQPSQHSNGASLHNQTKVTISQIPEQAIGDSFVIHCQIHKLETKHGWIYDACSKCGSKVKIDDPSWICPLCKKKPDSIEPKMKIHYLVRDQTGSASVIFWDKLAVPLVKKTASELISSLNEKKEKDDDDDDIPKELDLPVGKNLLLKLKMNEFNKKYPTSSISVGQYTICEDLSNQFSEAITESSFEGCSEVKATAESVDAESVTPLVTPLDHSTISDLSQHVTPAPIKGKRRITNKRNVVKDDIPTTSLQSSAGPAEERVTKVIKQEK 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01349 531 SUPERFAMILY Nucleic acid-binding proteins 120 247 IPR012340 -
Accr13g01349 531 CDD RPA1_DBD_A_like 19 106 - -
Accr13g01349 531 Gene3D - 262 436 IPR012340 -
Accr13g01349 531 Gene3D - 4 109 IPR012340 -
Accr13g01349 531 CDD RPA1_DBD_B_like 142 245 - -
Accr13g01349 531 Gene3D - 113 255 IPR012340 -
Accr13g01349 531 SUPERFAMILY Nucleic acid-binding proteins 6 107 IPR012340 -
Accr13g01349 531 MobiDBLite consensus disorder prediction 505 531 - -
Accr13g01349 531 Pfam Replication factor-A C terminal domain 294 416 IPR013955 -
Accr13g01349 531 SUPERFAMILY Nucleic acid-binding proteins 279 416 IPR012340 -
Accr13g01349 531 PANTHER OS03G0429900 PROTEIN 7 474 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Accr13g01349 531 Pfam Domain of unknown function DUF223 43 111 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01349 Accr-Chr13 20055590 20060901 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01349 16 355 Core DNA Replication Machinery Family AT2G06510 23.691 2.98e-14 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01349 - - pcin:129290097 439.884