Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01325 ATGGGAAGGAGAAATGGAGGGAGGTCACTGCTTGAAATTCTTCGTCGTCGCCTTGAGTCCTGCAAATCCAGTTACTCAACTGTTGATGAAATTGTGAACCATCTTCGCGCAAATTACCCTGATTACCAGCGAACAAAACGACAAACTTTGATTCGATTTGTTAAAGAAGCTTTGGAGTCATCCAAGCGTGGGAACAAGCAATTGAACAGAAAGCCCCATACTCCTATATTGAAGCGTCACGGTTCAGAAGATAATGATGAAGATGATGAAGAAGAAGAACTTCAAAGTGCATCTCGAAAGAGGCGCAAGAAAGCTGATGTAAGTGAAGAGAGATTGCAAAAAATTGAGAGTTTACACCTTCAAATGTTACATAGGGATGAGAGCTGCCGTTTATCAACCTCTACTGCCTCAACTTCTAATCCGTCATCTTCATCAGAGTCTGAAAAGAGTGATGGCGAAGATGGGACTGTGTCTACATCAGAGAATGCAATTTATGAGGAGAAAGTGGAACCAGCCTTTGACTTGATGAAAACAACGTTGCGGGCTTCATACTCAGGAACAAAGAATGTGAAATCTACAGCAGAGGAGAAAAACGTTGAACTGGAGGTGACTAATAATAATAAGGCAACTGACATTGATGTTATGTATGGGGTTGGAGGTAACATGAATGATGATTTCGAACCAAAAAGGCAATTGAGAGGTTCAGTTTCGAATGGTAATGGTGATGTTGAAGTCAAGGGGAAGAGTGTTCCTAGATTCAAAGATTTGGGTGGGATGGACAAGGTGCTAGAGGAATTGATAATGGAAGTAATTGTTCCTCTTTATCATCCACAGTTGCCAAGAAAGTTAGGGGTGCAACCAGTGACAGGGATTTTGTTACATGGACCCTCAGGATGTGGGAAAACCACTCTGGCGCGTGCTATAGCTAATGAAACTGGTTTTCCGTTCTATGAGAGATCAGCTACAGAACTGGTTTCCGGGGTTTCAGGAGCGTCTGAAGAAAACATCAGGGAGCTTTTTTCTAAAGCATATAGGACCGCCCCATCAATTGTCTTTATTGATGAGATTGATGCAATTGCTTCAAAAAGAGAGAATTTACAACGTGAGATGGAGAAACGAATCGTGACACAATTGCTGACTTCAATGGATCAATCGAGCAGGCTCTCACAACCCGCTGGTAGTTCAGAAAGTTCTGATGCTCATCCTGGCTATATTCTTGTTATCGGAGCTACAAATAGGCCTGATGCTATTGACCCTGCCCTAAGAAGGCCGGGGCGATTTGACCATGAAATTTTTCTTGGTATTCCTGATGAATATGCTAGGGAGAAGATCTTGTCTGTGCTTGCTCGCAATCGCAATCTACCTCTGGAGGGCTCATTTGATCTTAGAAAAATAGCCAAGTCTACACCAGGTTTTGTTGGAGCAGATTTGAAAGCTCTAGCTTACAAGGCTGGTAACCTAGCAATGAAAAGGATTATTCATGAAAGGAAACGTGAATTATCCCAAGATCTTTTAGATGAGCATGATAAATATTGTTGGAGGCAACCTTGGTTACCAGAAGAGATGGATAAGCTTGTCATCAGAATGTCAGATTTCGAGGAAGCAATCCAATTGGTTCAACCTTCAACAAGAAGAGAAGGGTTTTCTTCCATTCCTAATGTAAAATGGGATGAAATTGGTGGGCATGATCTTCTGAGACAAGAGTTTGAGGATCATATTATTGGACGCATAAAATATGCAGATGATTATAAGGAATTTGGGGTGGATCTTGAGGCTGGATTTTTGCTCTATGGACCACCAGGATGTGGTAAAACATTGATTGCCAAAGCTGTTGCCAATGAAGCAGGAGCTAATTTTATTCATATCCAGGGCCCTGAACTTCTAAATAAATATGTTGGAGAAAGCGAGCTAGCGATACGGACATTGTTTAGTCGTGCAAGAACATGTGCACCTTGCATTCTTTTTTTGGACGAGGTGGATGCACTGACAACCAAACGTGGAAAAGAAGGTGGATGGATTGTTGAGCGACTGTTGAACCAGTTACTTGTTGAGTTAGACGGTGCAGAGCAAAGGCAAGGTGTTTTTGTTATTGGAGCCACTAACAGACCTGACGTGATGGACCCTGCGGTCCTTCGGCCTGGTAGGTTAGGTAAACTTCTGTATGTTCCTCTCCCAAGCCCAGATGAACGAGGCTTGATCTTAAAAGCTCTTGCAAGGAAGAAGCCAATTGATGACAGCGTGGATTTGTGTGCCCTTGGAAGAATGGAAGCTTGTGAAAATCTCAGCGGTGCTGATCTTGCTGCATTGATGAGTGAAGCAGCGCTGGCTGCTGCTAAAGAGAAGAGGACTTCAGGTGCATCGACCATCAAGATCAGCCATTTTAAGCCTGCTCTCATTAAAACCTCTCCCTCAGTGTCAGACGAGCAAAGACAATACTATCAACGATTGTCAGAGACTTTTAGGGCTGCATGA 2472 0.43 MGRRNGGRSLLEILRRRLESCKSSYSTVDEIVNHLRANYPDYQRTKRQTLIRFVKEALESSKRGNKQLNRKPHTPILKRHGSEDNDEDDEEEELQSASRKRRKKADVSEERLQKIESLHLQMLHRDESCRLSTSTASTSNPSSSSESEKSDGEDGTVSTSENAIYEEKVEPAFDLMKTTLRASYSGTKNVKSTAEEKNVELEVTNNNKATDIDVMYGVGGNMNDDFEPKRQLRGSVSNGNGDVEVKGKSVPRFKDLGGMDKVLEELIMEVIVPLYHPQLPRKLGVQPVTGILLHGPSGCGKTTLARAIANETGFPFYERSATELVSGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIASKRENLQREMEKRIVTQLLTSMDQSSRLSQPAGSSESSDAHPGYILVIGATNRPDAIDPALRRPGRFDHEIFLGIPDEYAREKILSVLARNRNLPLEGSFDLRKIAKSTPGFVGADLKALAYKAGNLAMKRIIHERKRELSQDLLDEHDKYCWRQPWLPEEMDKLVIRMSDFEEAIQLVQPSTRREGFSSIPNVKWDEIGGHDLLRQEFEDHIIGRIKYADDYKEFGVDLEAGFLLYGPPGCGKTLIAKAVANEAGANFIHIQGPELLNKYVGESELAIRTLFSRARTCAPCILFLDEVDALTTKRGKEGGWIVERLLNQLLVELDGAEQRQGVFVIGATNRPDVMDPAVLRPGRLGKLLYVPLPSPDERGLILKALARKKPIDDSVDLCALGRMEACENLSGADLAALMSEAALAAAKEKRTSGASTIKISHFKPALIKTSPSVSDEQRQYYQRLSETFRAA 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01325 823 MobiDBLite consensus disorder prediction 60 110 - -
Accr13g01325 823 Gene3D - 725 799 - -
Accr13g01325 823 Gene3D - 436 546 - -
Accr13g01325 823 Gene3D - 552 814 IPR027417 -
Accr13g01325 823 PANTHER AAA-FAMILY ATPASE 90 821 - -
Accr13g01325 823 MobiDBLite consensus disorder prediction 94 110 - -
Accr13g01325 823 Gene3D - 243 434 IPR027417 -
Accr13g01325 823 SMART AAA_5 287 437 IPR003593 GO:0016887
Accr13g01325 823 SMART AAA_5 590 726 IPR003593 GO:0016887
Accr13g01325 823 MobiDBLite consensus disorder prediction 129 165 - -
Accr13g01325 823 ProSitePatterns AAA-protein family signature. 405 423 IPR003960 GO:0005524|GO:0016887
Accr13g01325 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 253 546 IPR027417 -
Accr13g01325 823 MobiDBLite consensus disorder prediction 129 146 - -
Accr13g01325 823 FunFam Cell division control protein 48 homolog C 436 546 - -
Accr13g01325 823 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 552 819 IPR027417 -
Accr13g01325 823 ProSitePatterns AAA-protein family signature. 694 712 IPR003960 GO:0005524|GO:0016887
Accr13g01325 823 Pfam AAA+ lid domain 460 495 IPR041569 -
Accr13g01325 823 Pfam AAA+ lid domain 747 795 IPR041569 -
Accr13g01325 823 Pfam ATPase family associated with various cellular activities (AAA) 595 723 IPR003959 GO:0005524|GO:0016887
Accr13g01325 823 Pfam ATPase family associated with various cellular activities (AAA) 291 433 IPR003959 GO:0005524|GO:0016887
Accr13g01325 823 FunFam Ribosome biogenesis ATPase RIX7 242 434 - -
Accr13g01325 823 FunFam ATPase, AAA family protein 552 730 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01325 Accr-Chr13 19582978 19589154 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01325 500 821 Calmodulin-binding Proteins AT3G56690 40.432 3.29e-66 237