Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01279 ATGGAAAGCGTTGACGATACCAAATCAAAGGATTTTTACAAAGTGTTGGAGGTTGATTATGATGCAACTGATGAAAATATCAAATTCAATTACCGAAGGCTTGCACTGAAATGGCATCCTGACAAGCACAAAGGTGACAGTGCTGTTACTGCAAAATTCCAAGAAATTAATGAAGCTTACAGTGTGCTGAGTGATCCTGCCAAACGAAATGAATATGATTCAACTGGAATCTACGAGATTGACAAGTATAGCCTGCAGGAATATCTTGCCAGATTCAAAGGGATGATACTTACCTGCAATGGACTTGGCATCAACCACGGTCAAATACGGTCACAACAATTGACTGAAACCGTTGAATCCCCCGATGAATGA 372 0.4032 MESVDDTKSKDFYKVLEVDYDATDENIKFNYRRLALKWHPDKHKGDSAVTAKFQEINEAYSVLSDPAKRNEYDSTGIYEIDKYSLQEYLARFKGMILTCNGLGINHGQIRSQQLTETVESPDE 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01279 123 FunFam Chaperone protein DNAj, putative 3 90 - -
Accr13g01279 123 Pfam DnaJ domain 11 73 IPR001623 -
Accr13g01279 123 ProSiteProfiles dnaJ domain profile. 11 76 IPR001623 -
Accr13g01279 123 SMART dnaj_3 10 68 IPR001623 -
Accr13g01279 123 Gene3D DnaJ domain 1 90 IPR036869 -
Accr13g01279 123 SUPERFAMILY Chaperone J-domain 8 98 IPR036869 -
Accr13g01279 123 CDD DnaJ 11 65 IPR001623 -
Accr13g01279 123 PRINTS DnaJ domain signature 13 31 IPR001623 -
Accr13g01279 123 PRINTS DnaJ domain signature 31 46 IPR001623 -
Accr13g01279 123 PRINTS DnaJ domain signature 68 87 IPR001623 -
Accr13g01279 123 PRINTS DnaJ domain signature 48 68 IPR001623 -
Accr13g01279 123 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 5 106 - -
Accr13g01279 123 ProSitePatterns Nt-dnaJ domain signature. 53 72 IPR018253 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01279 Accr-Chr13 18048795 18052627 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01279 1 74 C2H2 Transcription Factor Family AT1G74250 40.506 2.25e-11 57.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01279 - - tcc:18599589 197.208
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g01279 13 18048795 18052627 Accr13g01279 13 18048795 18052627 ECH