Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01275 ATGGATTTTCAGCTTATTTTTTGGGATTTCAAGATATCCAATGTCCTGCTGGATGAGGACTTCAATGCAAAGCTTTCTGATTTCGGACTTGCTAGGCAAGGACCTTCAGAAGGATTTGGTCATGTTTCTACATCTATAAGAAAATGTCTATCTTCTGGAGAAAATTCTTAA 171 0.3684 MDFQLIFWDFKISNVLLDEDFNAKLSDFGLARQGPSEGFGHVSTSIRKCLSSGENS 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01275 56 PANTHER OS01G0588500 PROTEIN-RELATED 4 46 - -
Accr13g01275 56 ProSiteProfiles Protein kinase domain profile. 1 56 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01275 56 SUPERFAMILY Protein kinase-like (PK-like) 4 42 IPR011009 -
Accr13g01275 56 Gene3D Transferase(Phosphotransferase) domain 1 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01275 Accr-Chr13 17895463 17895969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01275 5 46 Receptor kinase-like Gene Family AT3G58690 59.524 1.24e-11 55.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Accr13g01275 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01275 - - rcu:8286426 85.5001