Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01207 ATGAGCAAGTCTTCGCTTTTAGGCTTTTACATCACAGTTTCCTTCATCGGTTTTGTCATTTCCAAGAGCATTATCTTAATCCTCCTCTACAAAAGATGGAAAAGAAAGCACATGATTAACGAAGAAGGCTATGCAGGTGGGAAGATGGTGATATTTAGGTCTTCGGGTCCACAATGCCTCGAATCTGATATGAAGTTGAAGAAGACATTGAGCCTGAATAATATGGAGGTGATTGGGTCTGGAGGTTATGGGACAGTTTATAAACTGAAAATAGATGACTCAAAAGCTTTTGCAGTGAAAAAACTGAACAGAGGAACTGCAGATAAAGGATTTGAGAGGGAGCTGGAAGCAATGGCAGACATAAAACACCGCAATATTGTAACTCTTCATGGATATTATGCTGCTCCACAATACAACCTCCTCATATATGAATTGATGCCTAACGGAAGTTTGGATAATTTCCTCTGCAGAAGAGCAGAGCAGAAGAAAACTTTAAATTGGTCAGCAAGATACAGAATAGCTATAGGTGCTGCAAGAGGAATATCTTATCTTCATCATGATTGTATCCCTCACATAATCCACAGAGATATCAAGTCAAGCAATATATTGCTGGACGAAAACATGGAGGCTCGAGTTTCTGATTTCGGATTAGCCACGTTGATGGAACCCGATAAAACCCATGTTTCCACAATTGTGGCTGGAACTTTTGGATACTTGGCTCCTGAATATTTTGATACAGGAAGAGCAACATTCAAGGGGGATGTCTACAGCTATGGAGTTGTACTGCTGGAGCTTTTAACTGGGAGAAAACCCAGTGATGAAACATTTGCTGAAGAAGGAACAAAGCTTGTCACATGGGTGAAGGCTGTTGTTCAGGAAAAGAAGGAGGAACTAGTTCTCGATGATAGGCTAGGGACCTGTCCAATGCAAGAAGTTAACCATGTGTTCAATATTGCCATGATGTGTCTCGAATCTGATCCCTTGAAAAGGCCAACAATGGAAGAAGTTGTCAACCTGCTTGAGCAAACGAAGCCAGACAAACTTGCTACAGCTTCCTGA 1059 0.4127 MSKSSLLGFYITVSFIGFVISKSIILILLYKRWKRKHMINEEGYAGGKMVIFRSSGPQCLESDMKLKKTLSLNNMEVIGSGGYGTVYKLKIDDSKAFAVKKLNRGTADKGFERELEAMADIKHRNIVTLHGYYAAPQYNLLIYELMPNGSLDNFLCRRAEQKKTLNWSARYRIAIGAARGISYLHHDCIPHIIHRDIKSSNILLDENMEARVSDFGLATLMEPDKTHVSTIVAGTFGYLAPEYFDTGRATFKGDVYSYGVVLLELLTGRKPSDETFAEEGTKLVTWVKAVVQEKKEELVLDDRLGTCPMQEVNHVFNIAMMCLESDPLKRPTMEEVVNLLEQTKPDKLATAS 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01207 352 FunFam Receptor-like serine/threonine-protein kinase 43 145 - -
Accr13g01207 352 ProSitePatterns Protein kinases ATP-binding region signature. 78 101 IPR017441 GO:0005524
Accr13g01207 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 192 204 IPR008271 GO:0004672|GO:0006468
Accr13g01207 352 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 15 344 - -
Accr13g01207 352 SMART serkin_6 72 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01207 352 ProSiteProfiles Protein kinase domain profile. 72 344 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01207 352 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 146 351 - -
Accr13g01207 352 Gene3D Phosphorylase Kinase; domain 1 58 145 - -
Accr13g01207 352 SUPERFAMILY Protein kinase-like (PK-like) 66 342 IPR011009 -
Accr13g01207 352 Pfam Protein kinase domain 74 338 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01207 352 Gene3D Transferase(Phosphotransferase) domain 1 146 350 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01207 Accr-Chr13 15959660 15962367 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01207 28 342 Receptor kinase-like Gene Family AT2G35620 49.533 4.36e-99 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Accr13g01207 Pkinase 5.9e-51 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01207 - - qsa:O6P43_001114 520.005