Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01202 ATGCAGCAATATCAGCTCAAGAAGGCTGTTAAAGAATTGGGTTTCTTCACTGAGTATGGGGATGCCAATAGATACAAGCTTCTTGAAGTTATTGGGAGGGGGAGCTATGGAGTTGTTTGTGCGGCAATTGACACACACACTGGAGAAAAAGTAGCAATAAAGAAGATCCATGATGTTTTTGACCATGCATCTGATGCCATTAGAATTCTTCGTGAAGTCAAATTACTCAGACTTTTAAGGCACCCAGATATCGTAGAAATTAAGCGGATAATGTTGCCACCTTCAAAGAGAGATTTTAAAGATATTTATGTAGTCTTTGAGCTCATGGAATCTGATCTCCATCAAGTCATTAAAGCTAATGATGATTTAACCCGTGAACATCATCAGTTTTTTCTTTATCAGCTCCTACGTGCATTGAAATATATGCATACAGCAAATGTGTATCACAGAGACCTGAAACCCAAGAACATATTGGCAAATGCAAATTGCAAACTCAAAATTTGTGATTTAGGACTGGCAAGAGTTGCATTCAATGATGCTCCGACAACAATATTTTGGACAGATTATGTTGCTACTAGATGGTACAGAGCCCCAGAACTCTGTGGGGCATTCTCTTCTAAGTATACACCGGCTATTGATATATGGAGCATTGGCTGCATCTTTGCTGAGGTCCTCACTGGAAAGCCATTGTTTCCGGGTAAAAGTGTTGTACATCAAATAGATTTGATTACTGATCTTCTTGGGACCCCATCATCAGAAACTATTTCAGGAGTTCGAAATGAGAAGGCGAGAAGATACTTGATGGAAATGAGTAAAAAACGGCCCGTGCCTTTTGAGCAGAAATTTCCAAATGCAGATCCATTGGCACTTCACCTTTTGCGAAGGCTTCTAGCATTTGATCCCAAAGATCGGCCAACTGCTGAAGAGGCACTGGCTGATCCTTATTTCAAGGGCTTGTCCAGAGTTGAGAGAGAACCTTCTTGTCAGTCAATTTCAAAGTTGGAATTTGAGTTTGAGAGGCGAAGGTTGACAAAGGAGGATATAAGAGAACTAATATATCGTGAAATACTGGAATATCACCCTCAGATGCTTAAAGATTACATGAGTGGAACTGAAGGCAACTTTCTCTATCCTAGTGCAATAGGCCAATTCAGAAAGCAATTTGCTTATCTTGAGGAAAATGGTGGCTCAGTCACTCCTCCAGAAAGGAGACATGTCTCCCTTCCAAGGCCCACTGTTCACTCCGGCACAGTTCCTCGTAATACAAATACAATGCCAAATTTCAATTTGTATGAGAACAAGCAAAATGCAGAAGAGGCATCTAGGAGTTTGAGTAGTTCCCGGCCTCCACCAAGGGCACCAACAGCTAAGCCAGGGAGAGTGGTAGGCCCAGTCTTACCGTATGAAAATGGCAGAAGCACAAATACTTTTTATGACCTGAGGATCTTTTATCAAAATGCTCTTCCCCAACAAGCAGCTGGTTCTCCTAACTGCTTTTTTAGACCTCAACCCACAAACTCACAGATGACTGTATCAGAGACACACCAGGTTTTTTCACAATACAAGCATCAAGTCCCATTCCAGCATTGTCATCTTCTAACCAGACCTGCGATTGACCTCAACACCAACCCGTATCACGAAGAAGTCAAGCTCGATCGGTTCGATAATCCCATGATTATGATGGATACCAGGCTGCTGCAGGCACAATCTCACTATGGTGCCGTTGGTGCTGCAGCAGTAACCATTGTAGCTAATAGACATTCTGGTGCTGTACAGTATGGGTTGTCATAG 1791 0.4221 MQQYQLKKAVKELGFFTEYGDANRYKLLEVIGRGSYGVVCAAIDTHTGEKVAIKKIHDVFDHASDAIRILREVKLLRLLRHPDIVEIKRIMLPPSKRDFKDIYVVFELMESDLHQVIKANDDLTREHHQFFLYQLLRALKYMHTANVYHRDLKPKNILANANCKLKICDLGLARVAFNDAPTTIFWTDYVATRWYRAPELCGAFSSKYTPAIDIWSIGCIFAEVLTGKPLFPGKSVVHQIDLITDLLGTPSSETISGVRNEKARRYLMEMSKKRPVPFEQKFPNADPLALHLLRRLLAFDPKDRPTAEEALADPYFKGLSRVEREPSCQSISKLEFEFERRRLTKEDIRELIYREILEYHPQMLKDYMSGTEGNFLYPSAIGQFRKQFAYLEENGGSVTPPERRHVSLPRPTVHSGTVPRNTNTMPNFNLYENKQNAEEASRSLSSSRPPPRAPTAKPGRVVGPVLPYENGRSTNTFYDLRIFYQNALPQQAAGSPNCFFRPQPTNSQMTVSETHQVFSQYKHQVPFQHCHLLTRPAIDLNTNPYHEEVKLDRFDNPMIMMDTRLLQAQSHYGAVGAAAVTIVANRHSGAVQYGLS 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01202 596 ProSitePatterns Protein kinases ATP-binding region signature. 31 55 IPR017441 GO:0005524
Accr13g01202 596 MobiDBLite consensus disorder prediction 395 467 - -
Accr13g01202 596 SUPERFAMILY Protein kinase-like (PK-like) 21 320 IPR011009 -
Accr13g01202 596 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 24 363 - -
Accr13g01202 596 FunFam Mitogen-activated protein kinase 111 339 - -
Accr13g01202 596 FunFam Mitogen-activated protein kinase 15 119 - -
Accr13g01202 596 ProSiteProfiles Protein kinase domain profile. 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01202 596 Pfam Protein kinase domain 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01202 596 Gene3D Phosphorylase Kinase; domain 1 40 362 - -
Accr13g01202 596 SMART serkin_6 25 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01202 596 CDD STKc_TDY_MAPK 24 361 - -
Accr13g01202 596 ProSitePatterns MAP kinase signature. 60 163 IPR003527 GO:0004707|GO:0005524|GO:0006468
Accr13g01202 596 Gene3D Transferase(Phosphotransferase) domain 1 111 339 - -
Accr13g01202 596 MobiDBLite consensus disorder prediction 414 450 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01202 Accr-Chr13 15876480 15881715 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01202 1 594 MAP Kinase Gene Family AT1G53510 66.561 0.0 784
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Accr13g01202 Pkinase 4.5e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01202 - - gmx:100800878 907.516