Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01187 ATGTTTTGTTTTCTCCGCAAAACCATCCCTAATTTTGGGCATATCATCGATTCCACTTGCCCAGCACTCGTACAACTTCTTTCTGTTCAAAACCATCGGCTACTCGTAAGGTACTGCAATTCAATCGCCTCAGGTCGGCATTCTTTCACTGTTTCATATCTCATTGACAAATGTGGGTTCTCACCCCAAGAAGCTGCTTCAGCTTCTAAGTTTGTCAGCTTCGAATCGCTAGAAAAACCAGATTCGGTCATTAATTTCTTAAAAAATCACGGATTCTTACAATCCCAGATTTTCCGTTTCATAAAAGAAGTCCCACAATTTCTTCGATATGATCCTGAGAAAAACTTTCTGCCCAAAATCGAGTTCTTCATATCCAGAGGTGTTTCCAGCTCAGACATCCCAAAGATCATATGTAGTTGTCCTACCATCATGAAAAGAAGCTTAAGCAAGCAGCTGATACCTTCATTTGATTTCTTTCGCGGTTTGTTTCAATCTGATGACAGATTCATTAAAGCTCTTAGATGTTGCTCTGCAATTCTTCTTGATATTAACACCCATGCCGTGCCTAATATGAAGCTATTAAGAGAAATCGGAGTTCCTGAATCAAATGTCATTAGAATGTTACAAATGTTTCCCAGGGCACTGGTTAAAAATCCTAGTGGATTTAAAATGAATGTCGAGGAAAGTAAGGAAATGGGGTTTGATCCTTCGAGGTTTCATTTTATTTTAGCCCTTTGGGCATTGTCATCACTGAGCAAATCTACATGGGAAAAGAAGGTTAATGTTTATAAGAAGTGGGGTTGGTCTGATGAAGACATTCTTGTAGCTTTTAGAAGGTATCCCATCTTTATGAAGGCATCAGAAGATAAGATTGATGCAATAATGGAGTTTCTTATCAACAAATTGGGGTGTGATGCTTCCACTGTTACCAGATATCCACACATTTTTTCATTGAGTTTGAAAAGGCGACTTATCCCAAGGGGCGCTGTCATTGAGGTTTTGTTGTCAAAGGGTCTGGTGAAAAAGAAAACTTTGCCTGTTGTATTTATCTACACTGATAGTACCTTTCTGAAGAGGTTTATCATGAACAACAAGAAGGAAGCTAGTGAATTATTGAATCTGTATAAGGGTAAATTGGAGCTTGCAACGTGA 1152 0.3872 MFCFLRKTIPNFGHIIDSTCPALVQLLSVQNHRLLVRYCNSIASGRHSFTVSYLIDKCGFSPQEAASASKFVSFESLEKPDSVINFLKNHGFLQSQIFRFIKEVPQFLRYDPEKNFLPKIEFFISRGVSSSDIPKIICSCPTIMKRSLSKQLIPSFDFFRGLFQSDDRFIKALRCCSAILLDINTHAVPNMKLLREIGVPESNVIRMLQMFPRALVKNPSGFKMNVEESKEMGFDPSRFHFILALWALSSLSKSTWEKKVNVYKKWGWSDEDILVAFRRYPIFMKASEDKIDAIMEFLINKLGCDASTVTRYPHIFSLSLKRRLIPRGAVIEVLLSKGLVKKKTLPVVFIYTDSTFLKRFIMNNKKEASELLNLYKGKLELAT 383
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01187 383 Pfam mTERF 84 303 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 Pfam mTERF 295 357 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 Gene3D Transcription termination factor 3, mitochondrial 165 370 IPR038538 -
Accr13g01187 383 PANTHER CGI-12 PROTEIN-RELATED 46 363 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 SMART mt_12 134 165 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 SMART mt_12 98 129 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 SMART mt_12 205 235 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 SMART mt_12 306 340 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 SMART mt_12 274 305 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 SMART mt_12 239 269 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 SMART mt_12 170 200 IPR003690 GO:0003690|GO:0006355
Accr13g01187 383 FunFam Mitochondrial transcription termination factor-like 148 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01187 Accr-Chr13 15707792 15708943 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr13g01187 mTERF 4.8e-32 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01187 K15031 - qsa:O6P43_003531 373.629