Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01182 ATGTTTTGCTTTCTCAGAAGAATCGTCGCTTCTCGGAGGCAGATCTCTCCTTCAACATTTCAACAATTACTTTGCGTTCAAAACCAATGGCTACCTTCCACCGCCAAGTACTGTAATTCAATTTCATCCAATGGCCATTCTTTCACAGTCTCATATCTCATTGACACTTGTGGCCTCTCACCCGAAGAAGCTGCTTCAGCTTCCAAGTATGTCCGCTTCGAATCGCGAGAAAAATCCGATTTGGTCATCAATTTCTTGAAGAATCTGGGGTTCTCAAAATCCCAGATTATTCGTTTCACACGAGAAGTCCCTCAATTACTTCGATATGACCCTGAGAAAACCCTACTCCCCAAGATCGAGTTTTTCATATCCAGAGGCGTTTCGAGCTCAGACATCCCTAAGCTCTTATGTAGTTGTCCTGACATTATGAGAAGAAGCTTGGATAAGCAGCTCATTCCTTCGTTTGATTTCTTTCGGGATTTGTTTCAATCTGATGACAAGTTCCTTAAATCTCTTACATGTTGTCCAGGCATTATTCTTCATACTAGCACCCGTGTCGTGCCTAATATTTTTCTATTAAGAGAAGCCGGAGTTCCTGAATCAAATGTCATTAGATTGTTGCTAGTGTATCCCAGGACATTGACTATAAATACTAGTCGTTTCAAGATGATTGTGAAGGAGCTTCAGGAAATGGATTTCGATCCTTTAAGGTCTCTATTTGTTATGGCCGTTTATGCATTGTCATCACTAAGCAAATCTACATGGTCAAAAAAGGCTAATGTGTATAAGAAGTGGGGCTGGTCAGACGAGGATATTATATCTGCTTTTAGAGCGTCTCCATTTTGTATGAAGGTATCTGAGGATAAAATTGAAGCAATAATGGAGATTCTCGTTGACAAATTGGGCTGTCCACCTTCCACTATTCCTAAATATGCAGTAGTTCTGACGTTGAGTATAAATAAGCGAATTATTCCGCGGGCATCTGTCTTTCAAGTTCTGTTGTCAAAGGGTCTGGTGAAAAAGGAAAGCTTGCTCGCAATATTTGTCTGCACTGAAAGGGACTTTTTGAAAAGATATATCCGTTGTGATGATGAAGAAAGTTGTAAACTCCTGAAGTATTATCAGGCCAAACTATCTTGCAAGCGAAATGAAGAAAGAAAGGTTATGGGTATGCACTGA 1179 0.4029 MFCFLRRIVASRRQISPSTFQQLLCVQNQWLPSTAKYCNSISSNGHSFTVSYLIDTCGLSPEEAASASKYVRFESREKSDLVINFLKNLGFSKSQIIRFTREVPQLLRYDPEKTLLPKIEFFISRGVSSSDIPKLLCSCPDIMRRSLDKQLIPSFDFFRDLFQSDDKFLKSLTCCPGIILHTSTRVVPNIFLLREAGVPESNVIRLLLVYPRTLTINTSRFKMIVKELQEMDFDPLRSLFVMAVYALSSLSKSTWSKKANVYKKWGWSDEDIISAFRASPFCMKVSEDKIEAIMEILVDKLGCPPSTIPKYAVVLTLSINKRIIPRASVFQVLLSKGLVKKESLLAIFVCTERDFLKRYIRCDDEESCKLLKYYQAKLSCKRNEERKVMGMH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01182 392 SMART mt_12 169 199 IPR003690 GO:0003690|GO:0006355
Accr13g01182 392 SMART mt_12 97 128 IPR003690 GO:0003690|GO:0006355
Accr13g01182 392 SMART mt_12 273 304 IPR003690 GO:0003690|GO:0006355
Accr13g01182 392 SMART mt_12 305 339 IPR003690 GO:0003690|GO:0006355
Accr13g01182 392 SMART mt_12 133 164 IPR003690 GO:0003690|GO:0006355
Accr13g01182 392 SMART mt_12 204 234 IPR003690 GO:0003690|GO:0006355
Accr13g01182 392 Pfam mTERF 211 356 IPR003690 GO:0003690|GO:0006355
Accr13g01182 392 Pfam mTERF 83 297 IPR003690 GO:0003690|GO:0006355
Accr13g01182 392 Gene3D Transcription termination factor 3, mitochondrial 164 372 IPR038538 -
Accr13g01182 392 FunFam Mitochondrial transcription termination factor-like 147 367 - -
Accr13g01182 392 PANTHER CGI-12 PROTEIN-RELATED 44 363 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01182 Accr-Chr13 15673450 15674628 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr13g01182 mTERF 1.4e-28 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01182 K15031 - qsa:O6P43_003532 355.14