Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01181 ATGTCTCGTTTTCTCAGCAGAGCGATTGCTTGTCGGCGGCACATTGTCAACGCAAATTCTCCTTCAACAACATTTCAAAATCTGCTTTCTGCTCAAATCCAATGGCTTTCTGTGAGGTACGCAACTTCAACCGCCTCAAATAATGCCCATTCTTTCACAGTCTCATATCTAATTGACACATGTGGCTTCCCCCCTCAAGATGCTGAAGCAGTTTCTAAGCGTGTCAGCTTAGAAACGCGAGATAAGCCAGATGTAGTTATCAATTTCCTGAAAACACAAGGATTTTCTCAATCCCAGATTCTTCGTTTCATTAGACATGACCCTGAATTTCTTCGATATGATCCTGACAAAACCTTTCTCCCCAAGATTGAGTTTCTCCAATCCCAAGGTGTTTCGAGCTCACTCATCCCTAGGCTTGTATGTAGTTGCCCTAACATTATGGGGAGAAGCTTAAGTAATCAGCTCATTCCTTCCTTTCATTTCTTTAGGGAATTGTTTCAATCCGATGAGAGGCTCATTAAAGCTCTCACATATTGCTCGAGCATTCTTCTATGCATTAACACACATGTCTTGCCTAATATGAAGCTGTTGCGAGAAGAAGGTGTTCCGGAATCGAATATCATGAAATTGCTGCAGTTTTTCCCTAGGACACTAACTAGAAAACCTGTTCAGTTTATGGGCGTTGTGGAAGAAGTGAAGGAAATTGGGCTTGATCCTTTGAAGTTTCACTTTCTTATGGCTGTTAGGGTATGCGTATCCATTAGCAAATCCACACGAGCGAAAAAGGCTTATGTTTATAAGAAGTGGGGTTGGTCTGACAATGACATTGTTGCAGCATTTAGAAAGTACCCCTTTTGTATGACAGTCTCAGAGGATAAGATTGATGCAATAATGGAGTTTCTTGTCCACAAGTTGGGCTATGAGTCTTCCATTATCAACAGATGTCCTTCAGTTTTCGCATTGAGTTTGCAAAGGCGAATTCTTCCAAGAGGTGCTGTCATTCGTGTTCTGTTGTCAAAGGGTCTGATGAAAGGGAAAACTTCATTATCAATATTTAAGTATTCTGAAGTTTACTTTTTAAGGAAGTTTCTGGTTTATCATGGGCAAAAAGTTAGTGGTTTATTAGATTTGTATCAGTCTAAATTGGATCTTGCAAGGTGA 1161 0.404 MSRFLSRAIACRRHIVNANSPSTTFQNLLSAQIQWLSVRYATSTASNNAHSFTVSYLIDTCGFPPQDAEAVSKRVSLETRDKPDVVINFLKTQGFSQSQILRFIRHDPEFLRYDPDKTFLPKIEFLQSQGVSSSLIPRLVCSCPNIMGRSLSNQLIPSFHFFRELFQSDERLIKALTYCSSILLCINTHVLPNMKLLREEGVPESNIMKLLQFFPRTLTRKPVQFMGVVEEVKEIGLDPLKFHFLMAVRVCVSISKSTRAKKAYVYKKWGWSDNDIVAAFRKYPFCMTVSEDKIDAIMEFLVHKLGYESSIINRCPSVFALSLQRRILPRGAVIRVLLSKGLMKGKTSLSIFKYSEVYFLRKFLVYHGQKVSGLLDLYQSKLDLAR 386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01181 386 Gene3D Transcription termination factor 3, mitochondrial 150 368 IPR038538 -
Accr13g01181 386 SMART mt_12 309 343 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 SMART mt_12 137 168 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 SMART mt_12 277 308 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 SMART mt_12 208 238 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 SMART mt_12 173 203 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 SMART mt_12 101 132 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 Pfam mTERF 250 350 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 Pfam mTERF 87 238 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 PANTHER CGI-12 PROTEIN-RELATED 49 365 IPR003690 GO:0003690|GO:0006355
Accr13g01181 386 FunFam Mitochondrial transcription termination factor-like 151 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01181 Accr-Chr13 15663780 15664940 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr13g01181 mTERF 1.7e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01181 K15031 - qsa:O6P43_003531 337.806