Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01176 ATGTTTACTTTTCTGCGCAGAGCCATCCCTTATCGGAGGCATATTATCAACGCATTCTCTCCTTCAACATTTCAGCTTCAACTACTTCTCCAAACCCAGTGGTCTTCTGTGAGGTACGCTAACTCAAATGCCTCAAACGGAAATTCTTTCGCTGTCTCCTATCTCATTGACTCCTGTGGCTTCTCACCCCAAAAAGCTGAAGCAGTTTCTAAGCGTGTCAGCCTCGAAACGCGAGATAAGTCAGATCTGGTTATCGAGTTTCTCAAAAGTCATGGATTCTCACAACCCCAGATTCGTCGTCTCATTGGAAGTTATCCAAAGCTTCTTCGATCTGATCCCGAGAAAACCTTTCTGCCCAAGATTGAATTCTTCAAATCCAGAGGCATTTCGAGCTCACACATCCCTCGGCTCATTAATAGTACTCCTAGCATCTTGAGAACAAGCTTAAGTAAGCGTCTCATTCCTTCCTTTAATTTCCTTCGAGATTTGTTTCAATCTGATGAGAAGCTCATTAAATCTCTTCAATATTGCTCGGCCATTCTTCTTGATCCTAAAACCTTTGTAGTGCCTAAAATGGAGCTTCTGCGGGAAGCAGGAGTTCCTCAATCAAACATCATCAAATATTTGCAGTTTTTCTCTAGAACAGTGATTTTTAGTCATGGTCGACTTAAGAAGGCTGTGGAGGAAGTGACAAAACTTGGTTTTGATCCTTTGAAGTTTCAATTTCTAGTGGCTGTCCATGTATGCATAAGCTTGAAAAAATCCACAAGGGATAAAAAGGCTGATGTATATAAGAAGTGGGGTTGTTCTGACAACGACATTGTTGCAGCATTTAGAAAGTTCCCTGTCTGTATGCAACTGGCAGAAGATCAGATTGATGCAAAATTTGAGTTTTTAGTCAATCAATTGGGCTGTAACCCTTCCATTATTATCAAATACGTTAGTGTTTTGGGATATAGTTTGAAAAAACGAATTGTTCCAAGAGCTGCTGTCCTTCAAGTTCTGTTGTCAAAGGGTCTGATGAAAAGTGAAACTTTTCTTGTAAACTTTATGCATACTGAAAAGGACTTTCTAAGGAGGGTTGTCCTTTGTCATGGGCAACAAGTCGCAAATGAGTTATTGGAGTTGTATCGCACAAAACTGGATCAAGCTAGATGA 1158 0.405 MFTFLRRAIPYRRHIINAFSPSTFQLQLLLQTQWSSVRYANSNASNGNSFAVSYLIDSCGFSPQKAEAVSKRVSLETRDKSDLVIEFLKSHGFSQPQIRRLIGSYPKLLRSDPEKTFLPKIEFFKSRGISSSHIPRLINSTPSILRTSLSKRLIPSFNFLRDLFQSDEKLIKSLQYCSAILLDPKTFVVPKMELLREAGVPQSNIIKYLQFFSRTVIFSHGRLKKAVEEVTKLGFDPLKFQFLVAVHVCISLKKSTRDKKADVYKKWGCSDNDIVAAFRKFPVCMQLAEDQIDAKFEFLVNQLGCNPSIIIKYVSVLGYSLKKRIVPRAAVLQVLLSKGLMKSETFLVNFMHTEKDFLRRVVLCHGQQVANELLELYRTKLDQAR 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01176 385 Gene3D Transcription termination factor 3, mitochondrial 166 370 IPR038538 -
Accr13g01176 385 FunFam Mitochondrial transcription termination factor-like 149 369 - -
Accr13g01176 385 Pfam mTERF 190 347 IPR003690 GO:0003690|GO:0006355
Accr13g01176 385 Pfam mTERF 85 209 IPR003690 GO:0003690|GO:0006355
Accr13g01176 385 PANTHER CGI-12 PROTEIN-RELATED 47 365 IPR003690 GO:0003690|GO:0006355
Accr13g01176 385 SMART mt_12 307 341 IPR003690 GO:0003690|GO:0006355
Accr13g01176 385 SMART mt_12 206 236 IPR003690 GO:0003690|GO:0006355
Accr13g01176 385 SMART mt_12 275 306 IPR003690 GO:0003690|GO:0006355
Accr13g01176 385 SMART mt_12 171 201 IPR003690 GO:0003690|GO:0006355
Accr13g01176 385 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Accr13g01176 385 SMART mt_12 135 166 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01176 Accr-Chr13 15640899 15654578 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Accr13g01176 mTERF 1.8e-18 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01176 K15031 - qsa:O6P43_003531 316.62