Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01174 ATGGGCAGCAACATGGAGAATAATCATGATGAATATGACGTTTCTCTTCATGCTATGTTGCTGGCAAGCGCCCAGCTTTACCCCGCAGTCCTAAATGCCGCCATTGAGCTCAACCTCTTTAAGATCATTGGTGAGGGAAGTCCTAAGGGCATGTCACCCTCTGAAATCGCTTCAAAGCTTCCAAATCCACATGATAACACGGCCCGCGGCCTCGATCGATTGCTATTTTTGCTTGCTAGTCATTCTGTTTTGACTTGTTCTTCTTCCGACAAGGTTGATGATGATGGTAGAACTGAGAGGCTTTATGCTCTATCTCCTGCCGGTAAATACATGTTCCGCAATGAAGTTGGAGCCTCTTATGCTTCACAGTTAAATTTAAGCAGAGATGTGTCTTATACGAAAGTTCTGGGAAACATCAAAGAAATTATACTGGACGGGGAAGAGGACCTGTTCAAGAAAGTTCATGGGATGTCGCTATATGAATATATGAAAAGAAATCCAACCTTGGAAACTCTTTTCCACAAGGCAATGTCTGATCGTTCATTCATGCAAATGACGCAGATCCTTGAGAAATACAAAGGATTTGAAGGAATATCAACACTTGTTGATGTTGGTGGTGGCATTGGCCAATGCCTCAAAATGATCATCTCCAAGTACCCTTCAATTCAAGGCATTAACTTTGATCTGCCACATGTTGTTCAACGAGCCCCATTCCACCCACGAATCAAATATGTTGGAGGAGACATGTTCCAAAGTGTGCCAGAAGGTGATGCTATAATGATGAAGGCTACAACTCATAACTGGACAGATGACAAATGCATACAAATTCTGAAAAATTGTCATAATTCCCTCAAGAAAGGTGGGAAGCTTATTATTATTGACGTAATAATGCCTGAAATACCAAAAGAGACTGATAGCCATAAATATGCTGCGATTGCTGACAACACCATGTTTCTGCTTGCTGGTGGGAAGGAAAGAACTGAGAAAGAATTCGAAGCACTTGGCAAAGCTGCTGGGTTTTCTATCTATCGTGTTGCTGCTCGTGTCTTCTCATCTTCGTTGGGAGTCATTGAGTTTTATAAATAA 1086 0.419 MGSNMENNHDEYDVSLHAMLLASAQLYPAVLNAAIELNLFKIIGEGSPKGMSPSEIASKLPNPHDNTARGLDRLLFLLASHSVLTCSSSDKVDDDGRTERLYALSPAGKYMFRNEVGASYASQLNLSRDVSYTKVLGNIKEIILDGEEDLFKKVHGMSLYEYMKRNPTLETLFHKAMSDRSFMQMTQILEKYKGFEGISTLVDVGGGIGQCLKMIISKYPSIQGINFDLPHVVQRAPFHPRIKYVGGDMFQSVPEGDAIMMKATTHNWTDDKCIQILKNCHNSLKKGGKLIIIDVIMPEIPKETDSHKYAAIADNTMFLLAGGKERTEKEFEALGKAAGFSIYRVAARVFSSSLGVIEFYK 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01174 361 FunFam Caffeic acid 3-O-methyltransferase 2 111 - -
Accr13g01174 361 PANTHER O-METHYLTRANSFERASE 18 350 IPR016461 GO:0008168
Accr13g01174 361 Gene3D Vaccinia Virus protein VP39 113 361 IPR029063 -
Accr13g01174 361 Pfam Dimerisation domain 30 79 IPR012967 GO:0046983
Accr13g01174 361 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 346 IPR029063 -
Accr13g01174 361 Pfam O-methyltransferase domain 139 341 IPR001077 GO:0008171
Accr13g01174 361 CDD AdoMet_MTases 200 297 - -
Accr13g01174 361 SUPERFAMILY "Winged helix" DNA-binding domain 11 115 IPR036390 -
Accr13g01174 361 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 19 361 IPR016461 GO:0008168
Accr13g01174 361 Gene3D - 2 111 IPR036388 -
Accr13g01174 361 PIRSF O-mtase 1 361 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01174 Accr-Chr13 15551139 15552905 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01174 1 361 Monolignol Biosynthesis Gene Families AT5G54160 48.370 5.70e-109 321
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01174 - - qsu:112031144 376.711