Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01169 ATGGGCCACTTTCAGAGTGATCATATCCCCGGAAATACGTGCAATGGTTATGGTAGTTCTCATACTTTTCCTGGTGGCGTTGAACGGCTATTAAGAGAAATAGAACTAAGTGGCAAGAACAAATCAAGTGGTAATAATCATGGGGGGCCTTTTAGACAACGTCTTTTGGTGGTAGCCAACAGGTTGCCAGTCTCAGCAGTTAGAACAAGTGAAGACTCGTGGTCCATGGAGATGAGTGCTGGCGGTCTTGTGAGTGCTCTTTTAGGTATCAAAGAGATTGAGGCAATTTGGATAGGTTGGGCTGGTGTCAATGTGCCGGATGAGATTGGACAGAAGACACTTACTAAAGCTTTGGCTGAAAAGAGGTGCATTCCAGTAATTCTTGATGAAGAGATTGTTCATCAATATTATAATGGTTACTGCAATAACATCTTGTGGCCCCTTTTTCATTACCTTGGACTTCCACAAGAAGATCGTCTTGCTACCACAAGGAGTTTCCAATCTCAGTTTGCAGCGTATAAGAAAGCAAATCAAATGTTTGCTGATGTTGTGAAAGAATACTATCAGGAGGGTGATGTTGTTTGGTGCCATGATTACCATCTCATGTTTCTTCCAAAATTCTTAAAGGATTATGACAGCAACATGAAAGTTGGCTGGTTTCTGCACACACCATTTCCATCTTCAGAAATTCATAGGATGCTGCCTTCTCGATCAGAGCTCCTGCATTCTGTTATTGCAGCTGATTTAGTTGCTTTTCACACTTATGATTATGCTCGGCACTTTGTTAGTGCTTGCACTCGGATTCTTGGGCTTGAGGGTACACCTAAAGGGGTTGAAGATCAAGGGAGGTTGACTCGAGTTACTGCATTTCCGATTGGGATAGACTCAGAGCGATTCATACATGCACTTGATCTTCCTGAAGTTAAGGAGAACATCAAAGAATTCGAAGAAAGATTTAAAGGCAGAAAGGTAATGTTAGGCGTCGATCGTCTTGATATGATTAAGGGAATTCCTCAGAAAATTCTAGCATTTGAAAAATTTTTGGAAGAGAATGCCTGTTGGCGTGATAAAGTAGTTCTGATTCAAATTGCTGTGCCAACAAGGACAGACGTTCTTGAATATCAAAAGCTTACAAGCCAGGTTCATGAAATTGTGGGTCGCATTAATGGAAGATTTGGAACACTGACTGCTGTTCCTGTACTTCACCTGGATCGCTCTCTTGAGTTTCATAAACTATGTGCTTTGTATGCTGTAACTGATGTAGCCCTTGTCACATCTTTGAGGGACGGGATGAATCTCGTCAGCTACGAATACGTGGCTTGCCAAAATTCAAAGAAGGGAGTACTCATTCTTAGTGAATTTGCTGGAGCTGCACAGTCTCTAGGTGCTGGTGCAATTCTGGTTAACCCATGGAACATCACAGAAGTCGCTGCTGCTATTGACCAGGCTCTGAACATGCCATCCGATAAAAGAGAGAAGTGGCATGCACGCAACTTTTTACATGTAAAAACTCACACTGCTCAGCAATGGGCAGAAACTCTTGTAAGTGAACTAAACCAGACTGTTGCTGAGCAAAGACGGAGGACAAGACAAATTCCAGCCACACTTCCAACCAAGGATGTGATGGAACGTTATCTCCAGTCAACTAACCGATTGGTCATTTTGGGATTCAATGGATGTTTAACGGAACCAGTGGACAAAAGAGGTGGTCAGATTAAAGAAATGGAACTTAAGTTGCACCCAGAATTAAAACAGCCATTGACAAAACTATGCAGCGACCCAAACACCACAATTGTTATTCTTAGTGGAAGTGGTAGAATAGTCTTAGAGGAGAATTTTAGGGAGTATAACCTGTGGTTGGCTGCGGAAAATGGTATGTTTATACACCCTGCAAAGGGAAAGTGGATGTCAACAATGCCAGAGCTTCTGAATATGGAATGGGTTGACAGTGTGAAGCATGTTATCGAGTACTTCACCGAAAGAACACCGCGGTCACTTTTTGAAGAACGGGAGACATCAATTGTGTGGAATTACAAGTATGCAGATGTTGAATTTGGAAGACTTCAAGCAAGGGACTTGCTGCAGCATCTCTGGACGGGTCCTATCTCTAATGCACCAGTTGATGTTATTCATGGTAGCCGATCTGTTGAAGTACGCGCTGTCGGTATAACAAAGGGAGCAGCTATGGACCGCATCCTAGGTCACATAGTACACTGGAAATCATCCATGACATCACCATTTGATTATGTCCTATGTGTAGGACATTTTCTGGCAAAGGATGAAGATGTTTTTACCTTTTTTGAGCCAGTATTTCCTTCTATTGATTTGGCTCGTCCACGAGCAAAGGAGACAGGTATAGATGAGTTTTGTGATGACAAGAGATTTCCTTTGAAGAATCCAACCAGTAAAAGTGGACCAAAGGCATCCAAAAATACTAATGCTCAAATGCCAAAGTCAAATTCTGAGATGTGTAATGCACCTTGGATTCCTACCCTTGGAACTGAAACAATTTCATGGGATATCCTAAACCTCAAGAGGGAGAATTATTTCTCTTGTGCTGTCGGACGGACTCAATCAAGTGCTCGGTATACGCTCGGATCATCATCAGATGATGTTGTTGCTTTCCTGAAGAAACTGGCTGCTGCTGCTGCATCTCCAAACTCTTAA 2667 0.4248 MGHFQSDHIPGNTCNGYGSSHTFPGGVERLLREIELSGKNKSSGNNHGGPFRQRLLVVANRLPVSAVRTSEDSWSMEMSAGGLVSALLGIKEIEAIWIGWAGVNVPDEIGQKTLTKALAEKRCIPVILDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVKEYYQEGDVVWCHDYHLMFLPKFLKDYDSNMKVGWFLHTPFPSSEIHRMLPSRSELLHSVIAADLVAFHTYDYARHFVSACTRILGLEGTPKGVEDQGRLTRVTAFPIGIDSERFIHALDLPEVKENIKEFEERFKGRKVMLGVDRLDMIKGIPQKILAFEKFLEENACWRDKVVLIQIAVPTRTDVLEYQKLTSQVHEIVGRINGRFGTLTAVPVLHLDRSLEFHKLCALYAVTDVALVTSLRDGMNLVSYEYVACQNSKKGVLILSEFAGAAQSLGAGAILVNPWNITEVAAAIDQALNMPSDKREKWHARNFLHVKTHTAQQWAETLVSELNQTVAEQRRRTRQIPATLPTKDVMERYLQSTNRLVILGFNGCLTEPVDKRGGQIKEMELKLHPELKQPLTKLCSDPNTTIVILSGSGRIVLEENFREYNLWLAAENGMFIHPAKGKWMSTMPELLNMEWVDSVKHVIEYFTERTPRSLFEERETSIVWNYKYADVEFGRLQARDLLQHLWTGPISNAPVDVIHGSRSVEVRAVGITKGAAMDRILGHIVHWKSSMTSPFDYVLCVGHFLAKDEDVFTFFEPVFPSIDLARPRAKETGIDEFCDDKRFPLKNPTSKSGPKASKNTNAQMPKSNSEMCNAPWIPTLGTETISWDILNLKRENYFSCAVGRTQSSARYTLGSSSDDVVAFLKKLAAAAASPNS 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01169 888 Gene3D - 574 735 IPR023214 -
Accr13g01169 888 SUPERFAMILY HAD-like 551 880 IPR036412 -
Accr13g01169 888 Pfam Glycosyltransferase family 20 54 519 IPR001830 GO:0003824|GO:0005992
Accr13g01169 888 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 53 521 - -
Accr13g01169 888 Gene3D - 641 721 - -
Accr13g01169 888 MobiDBLite consensus disorder prediction 793 821 - -
Accr13g01169 888 MobiDBLite consensus disorder prediction 802 821 - -
Accr13g01169 888 CDD HAD_TPP 552 770 - -
Accr13g01169 888 Gene3D Glycogen Phosphorylase B; 301 504 - -
Accr13g01169 888 Pfam Trehalose-phosphatase 574 769 IPR003337 GO:0003824|GO:0005992
Accr13g01169 888 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1-like 301 504 - -
Accr13g01169 888 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 43 881 IPR001830 GO:0003824|GO:0005992
Accr13g01169 888 Gene3D Glycogen Phosphorylase B; 46 300 - -
Accr13g01169 888 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 641 721 - -
Accr13g01169 888 CDD GT20_TPS 54 519 IPR001830 GO:0003824|GO:0005992
Accr13g01169 888 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 1 46 300 - -
Accr13g01169 888 NCBIfam alpha,alpha-trehalose-phosphate synthase (UDP-forming) 54 520 IPR012766 GO:0003825|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01169 Accr-Chr13 15349931 15362554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01169 52 886 Trehalose Biosynthesis Gene Families AT1G78580 74.562 0.0 1301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01169 K16055 - qsa:O6P43_001098 1321.61