Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01155 ATGAAGAGCAGAAGCATGAACATAACTTTCCTCTTTCTCCTCATCTCTATTTTCTGGGCTTCCTCTGCATCTGGAGCCACCAACATAGATCCATCTGAAAAGGAAGCTCTGATGAGCATAGCGAAGACGCTGGGGAAGGAAGATTGGAACTTCAGTGTAGATCCATGCCATACTTCTGATCCTGCCTTTGCTACCAGCACCTGGTTTAATCCATACCCTGTCGACAAAGAAAGTCAAAACGCTGTCGTATGCAATTGCTCCATTGCCGATGACGACTTCTGTCATGTTGTCAACATAACCCTGAAGAAGCAAAGTCTCCGGGGAAAACTCCCGCCAGAACTCGTCAGATTACCTTACCTTTCCGTTATCGACCTGAGCCGCAACTACCTTAGCGGTCCAATCCCTTCAAGTTGGGCTTCCATTCCACTTAAGCACATTTCTGTTCTTGGCAACCGAATAACGGGTGGAATCCCTGTGGAGCTAACGAAGATCACTACTCTGCAACGTTTGGTCCTCGAGTTCAACCAGCTTTCTGGAAATCTTCCTCCTGAGCTTGGCAATCTTCTCCAACTTGAAGGACTGCTTCTTACCTCCAACAACCTCACTGGGGAAATACCGCCAACTTTCACAAAGCTCACTAATTTGACGGATGTTCGATTAGGTGACAATCGGTTCTCTGGAAAGATACCTAACTTTATTCAGAACTGGAAAAGTCTTGAGACAATGATGGTTCATGGGAGTGGTTTGAGTGGACCGATTTCTGGAATTTCATTTCCTGAGAAATTGAAGGACTTGAGGATAAGTGACTTAAATGGACCTAATTCATCATTTCCTGCGCTCAATCACTTGACGGAATTGAAAACATTGATATTGAGGAGTTGCAATATCAATGGAACAATACCACCGTATCTTTGGACAATGGGAAATTTAAAAACCTTAGACCTGAGCTTTAACAAATTGTTGCAAGGAAAAATTCCAGATGACGCTGCTCCACTATCACAAGAGGATCACATGTATTTAACTGGAAACCTTCTCAATGGATCTGTGCCTGAGTTGAACAAAGTTGAATACATGGATCTTTCATATAACAACTTTACAAGCCAAAACACATGGGAGAAGTGTGGTCAGTCAAATGTGAACCTGTTTGGAGACCCTTTGATGGCCAATGACTCAGAATCTGTTACTTGCATGAGAAGCCGTTGTTCTGAAACTTGGTACTCTGTCTACATAAATTGTGGTGGAAGTGGGGCCACCATTGAAGGTCAAATGTATGATGCTGATTTGGACCTAGCTAAACACGGATTTGCAAAGAGTGGAGCTAACTGGGCAATTAGCAATACTGGTCACTTTCTAGATGCAAAACAAAACTCTAACTACGGTGCAGAAAACAAATATAATCTCTCTGTTCCGAATGTTGAACTGTACAGCAACGCACGTCTTTCCCCACTTTCTTTGACCTATTATTCTTATTGCCTGGGAAATGGACCGTACACAGTGAGGCTCCATTTTGTGGAGATAATGTTCACTGATGATCAAACATATAAAAGCCTTGGAAGGCGTGTATTTGATGTCTACATTCAGGAACAGCGAGTGCTGAAGGATTTCAACATTGTAAATGAAGCAGGGGGGGTTGGCAAGCTAGTCATAAGAAATTTTACTGTAAATGTTACAAGTGGCACCTTAAAGATTCGCTTCCACTGGGCCGGGAAAGGAACAACTGCTATACCAGAAAAGTCAGTTTATGGCCCCCTAATTTCAGCTATATCTGTAACTTCTGACTTTAAACCTCCAAGAAGCATCCCCGGAGCAGTTGTGGCTACAATCGTGGCTGCAGGAGTGGGCATTGTCATCTTGATATTGGGCATTCTCTGGTGGAGAGGTGCCCTAGGAAAAAGAAGTTCATTAGCAATAGAGCTGAAGAGCTTAGATCTGCAAACTGGTTTATTTAGCTTGCGCCAAATTAAAGCAGCAACAAATAACTTTGATGCATCCAATAAGATTGGAGAAGGAGGATTTGGTCCTGTTTACAAGGGCTTTTTATCAGATGGCACACTGATAGCAGTGAAGCAGCTTTCTTCCAAATCAAACCAAGGGAACCGTGAGTTTATCAATGAGATAGGCATGATCTCTGCTTTGCAACACGCTTGCCTTGTTAAGCTTTATGGTTGTTGTGTTGAGGGGGATCAGTTGTTGTTGGTATATGAATACATGGAAAACAATAGCCTTGCTCGTGCCTTGTTTGGACTAGAGGAATGCCATTTAAAATTGGATTGGCCAACGAGACAGAAGATTTGTGTTCATATTGCCCGAGGTTTGGCTTTCCTTCATGAAGAATCGAGACTAAAGATTGTTCATCGGGACATCAAGGCCACTAATGTGCTACTTGACAAAGACTTGAATGCAAAAATATCAGATTTTGGGCTAGCAAAGCTCAATGAAGAGGAAAATACCCACATAAGCACCCGAATTGCTGGGACCTATGGATACATGGCACCGGAGTATGCAATGCATGGGTATTTGACTGACAAAGCAGATGTTTATAGTTTTGGAATTGTTGCTTTGGAAATTGTAAGTGGAAGGAGTAACACTTTTCGTCGACAAAAGGAAGACTGCTTCAATCTTCTTAATTGGGCACATGTTTTGAAAGAGAATGGCTATCTAATGGAGCTAGTTGATTCAAGGCTGGGTTCAGAATTTGACAGAGAGGAGGTAATGGTGATGATCAATGTGGCTCTCCTATGCACCAATCCATCTTCATCACTCAGGCCCGCCATGTCTTCAGTACTAAGCATGCTCGAAGGAAGAACTGTAGTTCCAGAAATCGTTTCTGATCAAAGTGAGGAAGCAAGTAAGATGAAGCTGGAAGCAATGAGACAGTATTACAGAGAGGTAGAAGGGAACCAGAAGAATGATGAGACTGAAACTCATTCCAAGGGTCTCTTAGGGATGTCCACTTCTTCATCCACATCAGCCAAAGATCTCTACCCTGTTCGCCTAGATTCTTCCTACTTCGAGCAAAGAAAATCTTAG 3030 0.4281 MKSRSMNITFLFLLISIFWASSASGATNIDPSEKEALMSIAKTLGKEDWNFSVDPCHTSDPAFATSTWFNPYPVDKESQNAVVCNCSIADDDFCHVVNITLKKQSLRGKLPPELVRLPYLSVIDLSRNYLSGPIPSSWASIPLKHISVLGNRITGGIPVELTKITTLQRLVLEFNQLSGNLPPELGNLLQLEGLLLTSNNLTGEIPPTFTKLTNLTDVRLGDNRFSGKIPNFIQNWKSLETMMVHGSGLSGPISGISFPEKLKDLRISDLNGPNSSFPALNHLTELKTLILRSCNINGTIPPYLWTMGNLKTLDLSFNKLLQGKIPDDAAPLSQEDHMYLTGNLLNGSVPELNKVEYMDLSYNNFTSQNTWEKCGQSNVNLFGDPLMANDSESVTCMRSRCSETWYSVYINCGGSGATIEGQMYDADLDLAKHGFAKSGANWAISNTGHFLDAKQNSNYGAENKYNLSVPNVELYSNARLSPLSLTYYSYCLGNGPYTVRLHFVEIMFTDDQTYKSLGRRVFDVYIQEQRVLKDFNIVNEAGGVGKLVIRNFTVNVTSGTLKIRFHWAGKGTTAIPEKSVYGPLISAISVTSDFKPPRSIPGAVVATIVAAGVGIVILILGILWWRGALGKRSSLAIELKSLDLQTGLFSLRQIKAATNNFDASNKIGEGGFGPVYKGFLSDGTLIAVKQLSSKSNQGNREFINEIGMISALQHACLVKLYGCCVEGDQLLLVYEYMENNSLARALFGLEECHLKLDWPTRQKICVHIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLNEEENTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVALEIVSGRSNTFRRQKEDCFNLLNWAHVLKENGYLMELVDSRLGSEFDREEVMVMINVALLCTNPSSSLRPAMSSVLSMLEGRTVVPEIVSDQSEEASKMKLEAMRQYYREVEGNQKNDETETHSKGLLGMSTSSSTSAKDLYPVRLDSSYFEQRKS 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01155 1009 Gene3D Transferase(Phosphotransferase) domain 1 737 957 - -
Accr13g01155 1009 SMART serkin_6 661 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01155 1009 Gene3D - 406 594 - -
Accr13g01155 1009 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 630 736 - -
Accr13g01155 1009 Gene3D Ribonuclease Inhibitor 32 207 IPR032675 -
Accr13g01155 1009 FunFam Putative LRR receptor-like serine/threonine-protein kinase 737 944 - -
Accr13g01155 1009 MobiDBLite consensus disorder prediction 977 991 - -
Accr13g01155 1009 Gene3D Phosphorylase Kinase; domain 1 628 736 - -
Accr13g01155 1009 MobiDBLite consensus disorder prediction 964 991 - -
Accr13g01155 1009 SUPERFAMILY L domain-like 83 350 - -
Accr13g01155 1009 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 14 963 - -
Accr13g01155 1009 ProSiteProfiles Protein kinase domain profile. 661 938 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01155 1009 Pfam Protein kinase domain 663 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01155 1009 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 405 593 - -
Accr13g01155 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 783 795 IPR008271 GO:0004672|GO:0006468
Accr13g01155 1009 SUPERFAMILY Protein kinase-like (PK-like) 644 939 IPR011009 -
Accr13g01155 1009 CDD STKc_IRAK 667 934 - -
Accr13g01155 1009 Gene3D Ribonuclease Inhibitor 208 405 IPR032675 -
Accr13g01155 1009 Pfam Malectin domain 408 588 IPR021720 -
Accr13g01155 1009 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 35 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01155 Accr-Chr13 15010241 15022115 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01155 17 964 Receptor kinase-like Gene Family AT1G53420 52.758 0.0 952
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01155 Pkinase 3.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01155 - - qsa:O6P43_001072 1189.87