Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01154 ATGGAGTTAGCGATTCCAAGTTGTAAAGTGATCTATGTTTTGTCATTTGGTTTAGTGGCTCTGAATGTATTCACATATTATGGAGGATGCAACGCTCAGCAGATACCAGATGAAGAAGTGAGAGCTCTAAAAGCAATATCATCCCAAATGAAGGATTTGAATTGGAAGGTGAGCCCTAATTCTTGTAAGGATGGGGGCTTCAAAAATCAGAGTTTTGTAGGAGAAGACATCATTAAGAATGTTACCTGTAATTGCACTTTCTCCAGTGGAAAAGTTTGCCATGTTACCCATATTGAGCTCAAGGGTCTCAATCTATCTGGAGTTCTACCCAGTGAATTTGGTAATCTTACCCAACTACAAGTGCTTGATTTGACTCGTAACTATCTGAATGGCTCAATCCCAAAGAGTTTTGCTAAACTTTCTCTTGTTGTAATATCCCTTCTGGCTAATCGACTCAGTGGTCCAATTCCAAAGGAAATTGGCAATATTCCAACTTTGGAGGAGTTAGTGTTGGAAGATAATCATTTTGAAGGAAGTCTTCCTTCTAGTCTAGGAAAATTGAAGCACTTACGCAGATTGCTTCTTTCTTCAAATAATTTCTCAGGGACGGTACCTGAAAGTTTTGGCAATCTAAAGAAACTAAAAGATTTTAGGTTAGATGGAAACACCGTGTCAGGAAAGTTACCCAGTTTTATTGGAAACTGGACCAATCTTGATAGATTGGATTTGCAGGGAACATCCATGGAAGGTCCAATTCCCCCAACCATAGCTTTGTTAACGAATTTGACTCAGTTGAGAATATCTGATTTGAATGGGAAAACAACAACGAGATTTCCTGATCTAAAGAATTTGAAATCCTTGAAACAATTGGTGCTGAGAAATTGCTCAATTATTGGTTCCATTCCAAATTACATTGGTCAAATGAAAGAGTTAGTTACTCTGGATTTGAGCTTCAACAAGTTGACTGGTGGAATCCCAGATGAAATAGATGACTTGAAAAAACTAGATTACATGTTTTTGACTCACAATTCTTTGAGTGGAAAGATTCCAGGATGGATACTAGTGAACAAAAATAACTTGGATTTATCTTACAACAACTTTTCAGATACTTCTGCTAAGATTTGTCAGCTCAAGGATGTAAACCTGGTTTCGAGCCTCTCATCTTCAGCAAAGACCTCAATTACATGCCTGAAAAAGGACCTTCCTTGTGGAGGAAAACCCAAGTATCATTCACTGTTCATAAACTGTGGAGGATCAGAAATGGACTTCGAGGGGAATAAGTATGAAAGTGACCTTGGTCAAGAGGGTATCTCATTTTTTAGTCCTGTTGATGACAGATGGGCTTATAGTAGCACTGGGACATACTTAGGAAACACTAAAGCTGATTACATTGCAAGAAACACATTTTCTCTTAACATGCTTGGTCCAAGCTTCTACCGGACCGCTCGCCTTTCCCCGTTGTCCCTCAAGTATCACAGCTTCTGTTTGCTTAATGGAAATTACAATGTTAAGCTTTACTTTGCTGAGATTATGTTTTCTAATGACCAAACATTCAGCAGCCTCGGGAGGCGCATATTTGATGTTTCAATTCAAGGGAGGAAATATTTGAGTGATTTTAATATTGTGGAGGAAGCTGGTGGTGTTGGTAAAGGAATCTTCAGGGATTTCAATGTTGAAGTGAATGAAAACACTTTGGAGATCCATTTGTACTGGGCAGGGAAAGGAACTACAGCTATTCCTACTAGAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTAACCCCAAACTTTGAAATTCCTTCCGAAGGGCTTTCTGCTGGAGCCATTGCTGGAATTGTGGTTGGATCAAGCGTGTTCCTCGTATTGATATTGTTTGTCCTTCGAAAGACCGGGTTCTTAGGTGGGAAAGATCAAAAAGACAAAGAACTATTAGATCTGAAAACGGGTTATTTCTCTTTAAGACAAATCAAAGCTGCCACTAATAACTTTTCTCCAGAAAATAAGATTGGTGAAGGAGGTTTCGGATCAGTGTACAAGGGTGTACTACCAGATGGTACAGTCATAGCTGTGAAGCAGCTCTCCTCCAAATCAAAGCAAGGAAATCGTGAATTTGTTAATGAAATTGGAATGATTTCTGCTTTGCAACACCCAAATCTTGTGAAGCTTTTTGGCTGCTGCATTGAAGGAAACCAGTTGTTATTGATATATGAGTACTTGGAGAATAACTGTCTTGCTCGTGCTCTTTTTGGTCATCAAGAACAGAAATTACAATTGGATTGGCCTACAAGAATGAAAATCTGTGTAGGTATAGCAAGAGGATTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGGGATATCAAGGCAACAAATGTCTTACTTGATAAGGATTTGAATGCTAAGATCTCTGACTTTGGTTTGGCCAAACTTGATGAAGAAGAGAATACTCATATCAGCACAAGAATAGCAGGAACAATAGGTTATATGGCTCCTGAATATGCAATGCGAGGCTACTTGACCGACAAAGCAGATGTTTATAGCTTTGGAGTTGTTGCTTTAGAGATTGTTAGTGGTAAAAGCAACACAAATTATAGACCAAAGGAAGAATTTGTTTATCTTCTTGACTGGGCCTACGTTCTTGAAGAGCAAGGAAACCTTCTTGAGCTAGTAGATCCAAGTCTTGGTTCGAGCTATTCCTCGAAAGAAGCCATGAGAATGTTGGAGTTAGCACTCTTGTGTACTAATCCATCTCCAACTCTCAGACCGCCCATGTACTCTGTTGTTAGCATGCTTGAAGGAAAATCACCGATCCAAGCGCCAATAATCAAGCGCCGGGAGGGAGATCAAGATGCAAGATTCAAAGCCTTCGAGATGTTATCACAAGACAGCCATAGTCAAACCTTTGTTTCTTCCAAAATCTCACAAGAAAGCATGGAGCAAAGACTTCAATCGATGGGTCCATGGGCTGACTCCTCTGGTACTCTTCCAAGTAAAGATTTCTCTTCATCTGATAAGCCTGTTAGGGATTCCAATGTATAA 3051 0.3943 MELAIPSCKVIYVLSFGLVALNVFTYYGGCNAQQIPDEEVRALKAISSQMKDLNWKVSPNSCKDGGFKNQSFVGEDIIKNVTCNCTFSSGKVCHVTHIELKGLNLSGVLPSEFGNLTQLQVLDLTRNYLNGSIPKSFAKLSLVVISLLANRLSGPIPKEIGNIPTLEELVLEDNHFEGSLPSSLGKLKHLRRLLLSSNNFSGTVPESFGNLKKLKDFRLDGNTVSGKLPSFIGNWTNLDRLDLQGTSMEGPIPPTIALLTNLTQLRISDLNGKTTTRFPDLKNLKSLKQLVLRNCSIIGSIPNYIGQMKELVTLDLSFNKLTGGIPDEIDDLKKLDYMFLTHNSLSGKIPGWILVNKNNLDLSYNNFSDTSAKICQLKDVNLVSSLSSSAKTSITCLKKDLPCGGKPKYHSLFINCGGSEMDFEGNKYESDLGQEGISFFSPVDDRWAYSSTGTYLGNTKADYIARNTFSLNMLGPSFYRTARLSPLSLKYHSFCLLNGNYNVKLYFAEIMFSNDQTFSSLGRRIFDVSIQGRKYLSDFNIVEEAGGVGKGIFRDFNVEVNENTLEIHLYWAGKGTTAIPTRGVYGPLISAISVTPNFEIPSEGLSAGAIAGIVVGSSVFLVLILFVLRKTGFLGGKDQKDKELLDLKTGYFSLRQIKAATNNFSPENKIGEGGFGSVYKGVLPDGTVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLFGCCIEGNQLLLIYEYLENNCLARALFGHQEQKLQLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTNYRPKEEFVYLLDWAYVLEEQGNLLELVDPSLGSSYSSKEAMRMLELALLCTNPSPTLRPPMYSVVSMLEGKSPIQAPIIKRREGDQDARFKAFEMLSQDSHSQTFVSSKISQESMEQRLQSMGPWADSSGTLPSKDFSSSDKPVRDSNV 1016
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01154 1016 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 635 739 - -
Accr13g01154 1016 Pfam Malectin domain 412 592 IPR021720 -
Accr13g01154 1016 ProSiteProfiles Protein kinase domain profile. 664 946 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01154 1016 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Accr13g01154 1016 Pfam Leucine rich repeat 164 222 IPR001611 GO:0005515
Accr13g01154 1016 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 278 370 - -
Accr13g01154 1016 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 25 967 - -
Accr13g01154 1016 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 409 597 - -
Accr13g01154 1016 Pfam Protein tyrosine and serine/threonine kinase 667 890 IPR001245 GO:0004672|GO:0006468
Accr13g01154 1016 FunFam Putative LRR receptor-like serine/threonine-protein kinase 740 947 - -
Accr13g01154 1016 ProSitePatterns Protein kinases ATP-binding region signature. 670 692 IPR017441 GO:0005524
Accr13g01154 1016 MobiDBLite consensus disorder prediction 974 1016 - -
Accr13g01154 1016 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Accr13g01154 1016 MobiDBLite consensus disorder prediction 974 1005 - -
Accr13g01154 1016 Gene3D Ribonuclease Inhibitor 253 412 IPR032675 -
Accr13g01154 1016 SUPERFAMILY RNI-like 97 373 - -
Accr13g01154 1016 Gene3D Phosphorylase Kinase; domain 1 633 739 - -
Accr13g01154 1016 ProSitePatterns Serine/Threonine protein kinases active-site signature. 786 798 IPR008271 GO:0004672|GO:0006468
Accr13g01154 1016 Gene3D - 413 597 - -
Accr13g01154 1016 Gene3D Transferase(Phosphotransferase) domain 1 740 955 - -
Accr13g01154 1016 SUPERFAMILY Protein kinase-like (PK-like) 649 936 IPR011009 -
Accr13g01154 1016 CDD STKc_IRAK 670 937 - -
Accr13g01154 1016 Gene3D Ribonuclease Inhibitor 68 252 IPR032675 -
Accr13g01154 1016 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53420 36 271 - -
Accr13g01154 1016 SMART serkin_6 664 929 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01154 Accr-Chr13 14944632 14953727 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01154 18 1005 Receptor kinase-like Gene Family AT1G53440 60.857 0.0 1214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01154 PK_Tyr_Ser-Thr 3.7e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01154 - - gmx:100815226 1400.57