Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01152 ATGGAGTTTGGGATTTCAAGCTCTAAATTTTTCTACCTCTTCATATTTGGATGCATCGCTTTGAATGCTTTCATGGACTACGAATCCAATGCTCAACTCATTCCAGAAGATGAAGTGGGACCTTTAAAAGCGATATCATCGAAGATGGGGAAATTGAATTGGAACGTGACCCGACATTCTTGTAATGACGGAGGCTTCAAAAATGCAACCATTGATGAGGACATCAAAAAGAATGTAGCATGCAATTGCACTTTCTCAAATGGAACAGTTTGTCATGTTACACATATTTTTATGACAGGTCTCAGTCTATCTGGATGTTTACCAAGTGAATTTGGAAACCTTAGCCATCTGCAACAACTAGACCTTTCGGATAACAAAATCTCTGGTTCAATCCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTAAGATTGAGAGATAATATGCTAAACGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGGAATTACGCATTCTAGACCTTTCGGGTAACTCAATATCTGGTCCAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTAAGATTGAGAGATAATATGCTAAACGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGGAATTACGCATTCTAGACCTTTCGGGTAACTCAATATCTGGTCCAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTTGATTTGTCATACAATTATCTAAATGGATCAATCCCAAGGAGGTTTGGTTTTCTCCCTCTTGTTGCGTTAAACCTTTCTGGTAACCAAATCTCTGGTCCAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTATTATTGAGAGATAATCAGCTAGAAGGAACTCTTCCTTCTAGTTTTGGAAAATTGAAGGAATTACGCTTACTGGATCTTTCTGGAAATAAGGTCTCTGGGACAATACCTAAAAGTTTTGGCGATATGAAGAAACTAAATAATATTGATTTGTCTAACAATTGTCTAAATGGATCAATCCCAAGGAGCTTTGGTTTTCTCCCTCTTGTTGCATTAAACCTTTCGGGTAACCAAATCTTTGGTCCAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTATTATTGAGAGATAATCAGCTAGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGGAATTACGCTTACTGGCTCTTTCTGGAAATAAGGTCTCTGGGACAATACCTGAAAGTTTTGGCAATATGAAGAAACTAAATAACATTGATTTGTCTAACAATTATCTAAATGGATCAATCCCAACGAGCTTTGGTAGACTCCATCTTGTTGCATTAGACCTTTCGAATAACTCAATCTCTCAACTAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTAACATTGAGAGATAATCTGCTAGAGGGATCTCTTCCTTTTAGTCTTGGAAAATTGAAGGAATTACGCTTACTGGTTCTTTCTGGAAATAACTTCTCAGGGACAATACCTGAAAGTTTTGGTAATATGAAGAAACTAGAATCTATTGCATTAGATGGGAGCAACATAACAGGGAAATTACCTAATTTTATTGGGAATTGGACTGAACTTGATAGCTTGTCTTTACAGGGAACATCTATGGAAGGCCCCATTCCTACAGCTATATCTCAATTAACAAAATTGAAAAGATTGATCATATCTGATTTGCATGGACCAGCGACAATGAGATTTCCTAATCTGGAAAAGTTGACATCATTAGAATACTTGATTTTGAGAAATTGCTCCATCCATGATCCCATTCCCAATTATATTGGTAAAATGGATAGCTTACTTTTTCTAGATTTGAGCTTCAACAAGTTGATCGGTGAAATCCCAAACAACATAAGTCACTTGATCCAAACAAGGCTACAGTACATGTTTCTAACTGAAAATTCTCTCAGTGGAAAAATTCCTGAATGGATACTGCAAGACAAATTCCCGAATGATTATCTTGATCTATCTTACAACAATTTCTCCGAGACAAATGCAACTACTTGTCAGCACCGTAATATAAACTTGGCCTCAAGCCTATCATCTTCAGCAAACACCATACATACCTGCTTAAAAAGGGGCCTCCCTTGTGGAAAAAAACCTAAGTATCATTCATTATTCATAAATTGTGGAGGACCAGACTTTGAACATGAGGGGAATAAATATGAAGCTGACACTAATCCCGAGGGTATCTCATTCTTTTTCCCTAAAGATGATAAATGGGCTTATAGTAGCACAGGAGTATACACCGAAGGACTTGATACTAATTTCATAGCAACAAAGAGATCTTCCCTCCATATGACTGGTCCAAGCTTATATGAAACAGCTCGTGTTTCCCCTTTATCTCTCAAGTATTATGGCCTCTGTATGATTAAGGGCAATTACAAAGTCAAGCTACACTTTGCTGAGATTATGTATTCTGATGACAAAAATTTCAGCAGCCTTGGAAAGCGCATATTTGATGTTTCAATTCAAGGTAGGAAATATTTGCGTGACTTCAACATTATGAAAGAAGCTGGTGGCGTTGGTAAGGGCATTGATAAAGAATTTAATGTTGATGTCAATGATAACACCTTAGAGATTCATTTATACTGGGCTGGGAAAGGAGTTATCTCTATTCCTGATTATGGTGGATATGGACCTCTTATATCTGCTATTTCAGTCAAACCAAACTTCAAAATTCCTGGGATTTCTGTGGGAGCCATTGCTGGAATTGTGGTTGGATCATGTGTGTTCCTCACCATACCAATAGTATTCATTCTTCGGAAGATGGGTTTTGTAGGTGGCAAAGATGCAAAAGATAAACAATTTTTAGATCTAAAAGCAGGTTATTTCTCTTTAAAACAAATTAAAGAGGCGACCAACAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTATACAAGGGTGTACTATCAGATGGTGTTGTCATAGCTGTGAAGCAGCTTTCCTCCAAATCTAAGCAAGGGAATCGTGAATTTGTTAATGAAGTTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAGCTCTATGGTTGCTGCGTTGAAGGAAATCAGTTGTTGCTAATATATGAGTACATGCAAAACAACAGTCTTGCTGGTGCTCTTTTTGGTGGCGAAGGACCAAAGATATCCTTGAACTGGCCTACAAGAATGAAAATATGTGTAGGCATAGCAAGAGGTTTAGCTTTTCTTCATGAGGAATCAAGGTTGAAAATTGTGCACAGGGATATTAAGCCAACAAATGTCTTACTTGATAAGGATTTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAGCTTGACGAAGATGAGAATACTCATATTAGCACAAGAATAGCTGGAACAATTGGTTATATGGCTCCTGAATATGCATTGCGAGGATACTTGACTGATAAAGCAGATGTTTACAGCTTTGGTGTTGTTGCTTTAGAAATCGTTAGTGGAAAAAGCAATACAAGTTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTGGATTGGGCCTATGTTCTTCAAGAGGAAAGAAATCTTATTGAGCTGGTGGATCCAAATTTGGGTTCAAGCTACTCATCACATGAAGCCATGATAATGTTGGAGGTGGCACTCCTATGTTGTAACCCATCTCCAACTCTAAGACCATCCATGTCTTCGGTTGTTGGCATGCTTGAAGGACAGTTGCCGATCCAAGCGCTGGTAATCAATCATCGGCAAAGTGGCCAAGATTTGAGATTCAATGCCTTTGAGATACAATCAGCTGAAGGTAGTCAATCCATTGATTCTTCTACAAAATCACACCAAAGTGTGGAGCAAAGAGTTGAAGAAATGAATTGTCCATCATCACAAGATAACCACAGCCAAACCTTAGCTTCTTCTTCGTTCTCATGA 3960 0.3803 MEFGISSSKFFYLFIFGCIALNAFMDYESNAQLIPEDEVGPLKAISSKMGKLNWNVTRHSCNDGGFKNATIDEDIKKNVACNCTFSNGTVCHVTHIFMTGLSLSGCLPSEFGNLSHLQQLDLSDNKISGSIPKEMGEITTLEELRLRDNMLNGTLPSSLGKLKELRILDLSGNSISGPIPKEMGEITTLEELRLRDNMLNGTLPSSLGKLKELRILDLSGNSISGPIPKEMGEITTLEEFDLSYNYLNGSIPRRFGFLPLVALNLSGNQISGPIPKEMGEITTLEELLLRDNQLEGTLPSSFGKLKELRLLDLSGNKVSGTIPKSFGDMKKLNNIDLSNNCLNGSIPRSFGFLPLVALNLSGNQIFGPIPKEMGEITTLEELLLRDNQLEGTLPSSLGKLKELRLLALSGNKVSGTIPESFGNMKKLNNIDLSNNYLNGSIPTSFGRLHLVALDLSNNSISQLIPKEMGEITTLEELTLRDNLLEGSLPFSLGKLKELRLLVLSGNNFSGTIPESFGNMKKLESIALDGSNITGKLPNFIGNWTELDSLSLQGTSMEGPIPTAISQLTKLKRLIISDLHGPATMRFPNLEKLTSLEYLILRNCSIHDPIPNYIGKMDSLLFLDLSFNKLIGEIPNNISHLIQTRLQYMFLTENSLSGKIPEWILQDKFPNDYLDLSYNNFSETNATTCQHRNINLASSLSSSANTIHTCLKRGLPCGKKPKYHSLFINCGGPDFEHEGNKYEADTNPEGISFFFPKDDKWAYSSTGVYTEGLDTNFIATKRSSLHMTGPSLYETARVSPLSLKYYGLCMIKGNYKVKLHFAEIMYSDDKNFSSLGKRIFDVSIQGRKYLRDFNIMKEAGGVGKGIDKEFNVDVNDNTLEIHLYWAGKGVISIPDYGGYGPLISAISVKPNFKIPGISVGAIAGIVVGSCVFLTIPIVFILRKMGFVGGKDAKDKQFLDLKAGYFSLKQIKEATNNFAPENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEVGMISALQHPNLVKLYGCCVEGNQLLLIYEYMQNNSLAGALFGGEGPKISLNWPTRMKICVGIARGLAFLHEESRLKIVHRDIKPTNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYALRGYLTDKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEERNLIELVDPNLGSSYSSHEAMIMLEVALLCCNPSPTLRPSMSSVVGMLEGQLPIQALVINHRQSGQDLRFNAFEIQSAEGSQSIDSSTKSHQSVEQRVEEMNCPSSQDNHSQTLASSSFS 1319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01152 1319 Pfam Malectin domain 725 905 IPR021720 -
Accr13g01152 1319 SMART serkin_6 976 1247 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01152 1319 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 722 910 - -
Accr13g01152 1319 Gene3D Ribonuclease Inhibitor 585 710 IPR032675 -
Accr13g01152 1319 PRINTS Leucine-rich repeat signature 117 130 - -
Accr13g01152 1319 PRINTS Leucine-rich repeat signature 162 175 - -
Accr13g01152 1319 Gene3D Transferase(Phosphotransferase) domain 1 1052 1265 - -
Accr13g01152 1319 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 319 429 - -
Accr13g01152 1319 SUPERFAMILY L domain-like 356 711 - -
Accr13g01152 1319 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 83 255 - -
Accr13g01152 1319 SMART LRR_typ_2 305 328 IPR003591 -
Accr13g01152 1319 SMART LRR_typ_2 281 304 IPR003591 -
Accr13g01152 1319 SMART LRR_typ_2 616 640 IPR003591 -
Accr13g01152 1319 SMART LRR_typ_2 210 234 IPR003591 -
Accr13g01152 1319 SMART LRR_typ_2 495 518 IPR003591 -
Accr13g01152 1319 SMART LRR_typ_2 400 423 IPR003591 -
Accr13g01152 1319 SMART LRR_typ_2 162 186 IPR003591 -
Accr13g01152 1319 SMART LRR_typ_2 114 138 IPR003591 -
Accr13g01152 1319 FunFam Piriformospora indica-insensitive protein 2 256 347 - -
Accr13g01152 1319 Gene3D Phosphorylase Kinase; domain 1 946 1051 - -
Accr13g01152 1319 ProSiteProfiles Protein kinase domain profile. 976 1257 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01152 1319 ProSiteProfiles Leucine-rich repeat profile. 116 138 IPR001611 GO:0005515
Accr13g01152 1319 Pfam Protein tyrosine and serine/threonine kinase 979 1244 IPR001245 GO:0004672|GO:0006468
Accr13g01152 1319 Gene3D Ribonuclease Inhibitor 387 486 IPR032675 -
Accr13g01152 1319 Gene3D Ribonuclease Inhibitor 487 584 IPR032675 -
Accr13g01152 1319 SMART LRR_sd22_2 210 242 - -
Accr13g01152 1319 SMART LRR_sd22_2 447 468 - -
Accr13g01152 1319 SMART LRR_sd22_2 616 639 - -
Accr13g01152 1319 SMART LRR_sd22_2 162 194 - -
Accr13g01152 1319 SMART LRR_sd22_2 114 146 - -
Accr13g01152 1319 SMART LRR_sd22_2 305 337 - -
Accr13g01152 1319 SMART LRR_sd22_2 400 432 - -
Accr13g01152 1319 CDD STKc_IRAK 982 1249 - -
Accr13g01152 1319 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 947 1051 - -
Accr13g01152 1319 Gene3D - 723 910 - -
Accr13g01152 1319 SUPERFAMILY Protein kinase-like (PK-like) 961 1248 IPR011009 -
Accr13g01152 1319 FunFam Putative LRR receptor-like serine/threonine-protein kinase 1052 1259 - -
Accr13g01152 1319 SUPERFAMILY RNI-like 98 414 - -
Accr13g01152 1319 FunFam Piriformospora indica-insensitive protein 2 348 443 - -
Accr13g01152 1319 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1098 1110 IPR008271 GO:0004672|GO:0006468
Accr13g01152 1319 Pfam Leucine rich repeat 473 532 IPR001611 GO:0005515
Accr13g01152 1319 Pfam Leucine rich repeat 378 437 IPR001611 GO:0005515
Accr13g01152 1319 Pfam Leucine rich repeat 308 365 IPR001611 GO:0005515
Accr13g01152 1319 MobiDBLite consensus disorder prediction 1279 1319 - -
Accr13g01152 1319 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 448 730 - -
Accr13g01152 1319 Gene3D Ribonuclease Inhibitor 292 386 IPR032675 -
Accr13g01152 1319 Gene3D Ribonuclease Inhibitor 51 196 IPR032675 -
Accr13g01152 1319 Gene3D Ribonuclease Inhibitor 197 291 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01152 Accr-Chr13 14750230 14764808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01152 300 567 Receptor kinase-like Gene Family AT1G53430 34.965 1.90e-37 151
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01152 PK_Tyr_Ser-Thr 4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01152 - - gmx:121173337 1149.81