Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01151 ATGGAGTTTGGGATTTCAAGCTCTAAACTTTTCTACCTCTTCATATTTGGATGCTTCGCTTTGAATGCTTTCATGGACTATGAATCCAATGCTCAACTCATTCCAGAAGATGAAGTGGAAGCTTTAAAAGCAATATCATCGAAGATAGAGAACTTGAATTGGAACATGACCCCACATTTTTGTATGGATGGAGGCGCCAAAAGTGAAATCATTAATGAAGACATCAAACGGAATGTAACATGCAATTGCGCCTTTTCAAATGGAACAGTTTGTCATGTTACACATATCGTTATGATAGGTCTCAGTCTATCTGGATTTTTGCCAAGTGAATTTGGATCCCTTATCCATCTGCAACAATTAATATTGAGAGATAATCTGCTAGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGGAATTACGCTTACTTGATTTGTCAAACAATTCTCTAAATGGATCAATCCTGAGAAGCTTTGCTAGACTCCCTCTTGTTGCATTAGGCCTTTCGGATAACCCAATCTCTGGTCCAATTCCAAAGGAAATTGGCGAAATTACAACTTTGGAGGAGTTATATTTGAGAGATAATCTGCTAGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGGAATTACTTGAACTGGTTCTTTCTGGAAATAACTTCTCAGGGATAATACCCGAAAGTTTTGGCAATATGAAGAAACTAAAACATATAGCTTTAGATGGGAGCAACATAAAAGGGAAATTACCCAATTTTATTGGGAATTGGACCGAACTTGAACACATGAATTTTAGAGGAACATCTATGGAAGGCCCCATTCCTACAGCTATATCTCAATTAACAAAATTGGAATATTTGGTCATATCTGATTTGCATGGACCAGCGACAATGAGTTTTCCTAATCTGGAAAATTTGACATCATTAACATTCTTGTCGTTGAGAAATTGCTCCATCCATGATACCATTCCAGATTATATTGGTAAAATGGAAAACTTAAATTTTCTAGATTTGAGCTTCAACAAGTTGATCGGTGGAATCCCAAAAAACATAAGTGACTTGACCAATCTTCAGTACATGTTTCTAACTGAAAATTCTCTCAGTGGAAAAATTCCTGAATGGATACTGCAAGGCAACAGTCATAATTTTGATCTATCTTACAACAATTTCTCAGAGACACAAGCAACTATTTGTCAGTACAATAAAGTAAATTTGGCCTCAAGCCTATCATCTTCAGCAAACACCACGCATATTTGTTTAAAAAGTGGCCTTCCTTGTGGAGGAAAACCTAAGTATCATTCATTATTCATAAATTGTGGAGGACCAGAAATTGAATATGACGGAAATAAATATGAAGATAACACTAATCCTGATGGTGTCTCGTTCTTTTCTCTTATTGATGATAAATGGGCTTATAGCAACACAGGAGTATACATGGCATCTACTTATAATTTTATAGCAACAAATAGATTTTCCCTCAATATTACCAGTCCAAGCTTCTATGAAACAGCTCGTATTTCCCCTGTATCTCTCAAGTATCATGGCCTCTGTATGATTAGTGGCAATTACAATGTCAAGCTACACTTTGCTGAGATTATGTATTCTCATGACAAAAATTTCAGCAGCTTTGGAAGGCGTGTATTTGATGTTTCAATTCAAGGTACAAAATATTTGCGTGACTTCGACATTATGAAGGAAGCTGGAGGCGTAGGTAAGGGCATTGTTAAAGACTTTAATGTTGATGTTAATAAGAACACCTTGGAGATTCAATTATATTGGGCTGGGAAAGGAACTATGTCTATTCCTGATTATAGTACATATGGACCTCTTATATCTGCTATTTCAGTCACACCAAACTTCAAAATTCCTGGGATTTCTATGGGAGCCATTGCTGGAATTGTGGTTGGATTATGTGTGTTCCTCATCATACCAATAGTATTCATTCTTCGGAAGATGGGTTTTGTAGGTGGCAAAGATGCAAAAGATAAACAATTTTTAGATCTAAAAACAGGTTATTTCTCTTTAAAACAAATCAAAGAGGCGACCAACAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGTTTTGGACCGGTATACAAGGGTGTACTATCAGATGGTGTTGTCATAGCTGTGAAGCAGCTTTCCTCCAAATCTAAGCAAGGGAATCGTGAATTTGTTAATGAAGTTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAGCTCTATGGTTGTTGCGTTGAAGGAAATCAGTTGTTGCTAATATATGAGTACATGCAAAACAACAGCCTTGCTGGTGCTCTTTTTGGTGGCCAAGGACCAAAGATATCCTTGAACTGGCCTACAAGAATGAAAATATGTGTAGGCATAGCAAGAGGTTTAGCTTTTCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGGGATATTAAGCCAACAAATGTCTTACTTGATAAGGATTTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAGCTTGACGAAGATGAGAATACTCATATTAGCACAAGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGATAAAGCAGATGTTTACAGCTTTGGTGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGCAATGCAAGTTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTTCAAGAGGAAGGAAATCTTATTGAGCTGGTGGATCCAAATTTGGGTTCAAGCTACTCCTCACATGAAGCCATGATAATGTTGGAGGTGGCACTCCTATGTACTAACCCATCTCCAACTCTAAGACCATCCATGTCCTCTGTTGTTGGTATGCTTGAAGGAAAGTTGCCGATCCAAGCTCCTGTATTCAAGCTTCAGCAGGGTGGCCAAAATGTGAGATTCAATGCCTTTGATATACAATCAGTTGAAGGTAGCCATAGTCAACAAACCTTTGATTCTTCTACAATATCACACCAAAGTGTGGAACAAAGAGTTGAAGCAATGGATTGTCCATCATCCCAAGATAACCAAAGCCAAACCTTAGCTTCTTCTTGA 3087 0.3758 MEFGISSSKLFYLFIFGCFALNAFMDYESNAQLIPEDEVEALKAISSKIENLNWNMTPHFCMDGGAKSEIINEDIKRNVTCNCAFSNGTVCHVTHIVMIGLSLSGFLPSEFGSLIHLQQLILRDNLLEGTLPSSLGKLKELRLLDLSNNSLNGSILRSFARLPLVALGLSDNPISGPIPKEIGEITTLEELYLRDNLLEGTLPSSLGKLKELLELVLSGNNFSGIIPESFGNMKKLKHIALDGSNIKGKLPNFIGNWTELEHMNFRGTSMEGPIPTAISQLTKLEYLVISDLHGPATMSFPNLENLTSLTFLSLRNCSIHDTIPDYIGKMENLNFLDLSFNKLIGGIPKNISDLTNLQYMFLTENSLSGKIPEWILQGNSHNFDLSYNNFSETQATICQYNKVNLASSLSSSANTTHICLKSGLPCGGKPKYHSLFINCGGPEIEYDGNKYEDNTNPDGVSFFSLIDDKWAYSNTGVYMASTYNFIATNRFSLNITSPSFYETARISPVSLKYHGLCMISGNYNVKLHFAEIMYSHDKNFSSFGRRVFDVSIQGTKYLRDFDIMKEAGGVGKGIVKDFNVDVNKNTLEIQLYWAGKGTMSIPDYSTYGPLISAISVTPNFKIPGISMGAIAGIVVGLCVFLIIPIVFILRKMGFVGGKDAKDKQFLDLKTGYFSLKQIKEATNNFAPENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEVGMISALQHPNLVKLYGCCVEGNQLLLIYEYMQNNSLAGALFGGQGPKISLNWPTRMKICVGIARGLAFLHEESRLKIVHRDIKPTNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNASYRPKEEFVYLLDWAYVLQEEGNLIELVDPNLGSSYSSHEAMIMLEVALLCTNPSPTLRPSMSSVVGMLEGKLPIQAPVFKLQQGGQNVRFNAFDIQSVEGSHSQQTFDSSTISHQSVEQRVEAMDCPSSQDNQSQTLASS 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01151 1028 Gene3D Phosphorylase Kinase; domain 1 655 760 - -
Accr13g01151 1028 ProSitePatterns Serine/Threonine protein kinases active-site signature. 807 819 IPR008271 GO:0004672|GO:0006468
Accr13g01151 1028 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 656 760 - -
Accr13g01151 1028 Pfam Protein tyrosine and serine/threonine kinase 688 953 IPR001245 GO:0004672|GO:0006468
Accr13g01151 1028 Pfam Malectin domain 435 614 IPR021720 -
Accr13g01151 1028 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 300 393 - -
Accr13g01151 1028 SUPERFAMILY RNI-like 100 393 - -
Accr13g01151 1028 ProSiteProfiles Protein kinase domain profile. 685 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01151 1028 Pfam Leucine rich repeat 187 246 IPR001611 GO:0005515
Accr13g01151 1028 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 987 - -
Accr13g01151 1028 CDD STKc_IRAK 691 958 - -
Accr13g01151 1028 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 432 619 - -
Accr13g01151 1028 FunFam Putative LRR receptor-like serine/threonine-protein kinase 761 968 - -
Accr13g01151 1028 Gene3D - 433 619 - -
Accr13g01151 1028 SUPERFAMILY Protein kinase-like (PK-like) 669 957 IPR011009 -
Accr13g01151 1028 Gene3D Ribonuclease Inhibitor 297 409 IPR032675 -
Accr13g01151 1028 Gene3D Ribonuclease Inhibitor 38 201 IPR032675 -
Accr13g01151 1028 PRINTS Leucine-rich repeat signature 141 154 - -
Accr13g01151 1028 PRINTS Leucine-rich repeat signature 330 343 - -
Accr13g01151 1028 Gene3D Ribonuclease Inhibitor 202 296 IPR032675 -
Accr13g01151 1028 FunFam Leucine-rich repeat receptor protein kinase EMS1 162 252 - -
Accr13g01151 1028 SMART LRR_typ_2 354 378 IPR003591 -
Accr13g01151 1028 SMART LRR_typ_2 306 330 IPR003591 -
Accr13g01151 1028 SMART LRR_typ_2 114 137 IPR003591 -
Accr13g01151 1028 SMART LRR_typ_2 209 232 IPR003591 -
Accr13g01151 1028 SMART LRR_typ_2 138 163 IPR003591 -
Accr13g01151 1028 Gene3D Transferase(Phosphotransferase) domain 1 761 965 - -
Accr13g01151 1028 SMART serkin_6 685 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01151 Accr-Chr13 14694820 14706632 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01151 1 1015 Receptor kinase-like Gene Family AT1G53440 52.953 0.0 1061
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01151 PK_Tyr_Ser-Thr 2.9e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01151 - - gmx:100817368 1213.75