Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01150 ATGGAGTTTGGGATTTCAAGCTCTAAACTTTTCTACCTCTTCATATTTGGATGCTTCGCTTTGAATGCTTTCATGGACTATGAATCCAATGCTCAACTCATTCCAGAAGATGAAGTGGAAGTTTTAAAAGCAATATCATCGAAGATACAGAACTTGAATTGGAGCGTGACCCCACGTTCTTGTATTGATGGAGGCTTCAAAAATGAAACCATTAATAATGTAACATGCAATTGCACTTTCTCAAATGGAAAAGTTTGTCATGTTACACATATTGATTGGTCTGACAATTATCTGTATGGATCAATCCCAAGGAGCTTTGCTAGACTCCCTCTTGTTGCATTAAACCTTTCGTATAACAAAATCTCTGGTCCAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTAAGATTGAGAGATAATATGCTAGAAGGAACTCTTCCTTCTAGTCTCGGGAAATTGAAGGAATTACGCATACTTGATTTGTCACACAATTATCTAAATGGATCAATTCCGGAGAGCTTTGCTAGACTCCCTCTTGTTGCATTAGACCTTTCGAGTAACCCAATCTCTAGTCCAATTCCAAAGGAAATTGGCAATATTACAACTTTGGAGGAGTTAAGCTTGAGAGATAATATGCTTGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGCAATTACGCAAACTGATTCTTTCTGGAAATAACTTCTCAGGGATAATGCCCGAAAGTTTTGGCAATATGAAGAAACTAGAATATATTGCCATAGATGGGAGCAACATAACAGGGAAATTACCTAATTTTATTGGGAATTGGACCGAACTTTATAGCATGTCTTTACAGGGAACATCTATGGAAGGCCCCATTCCTACAGCTATATCTCAATTAACAAAATTGCAAAGATTGGCCATATCTGATTTGCATGGACCAGCGACAATGAGATTTCCTAATCTGGAAAAGTTGACATCATTAGAATACTTGACGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTATATTTTCTAGATTTGAGCTTCAACAAGTTGATCGGTAAAATCCCAGACAACATAAGTCACTTGATCCATTCAAGGCTATCGTACATGTTTCTAACTGAAAATTCTCTCAGTGGAAAAATTCCTGGATGGATACTGCAAGACAACAGTAATTATTTGGATCTATCTTACAACAATTTTTCGGAGACACCTATACTTGCTTGTCAGTATAATAATGTAAACTTGGCCTCAAGCCTATCATCTTCAGCAAACACCACACATACCTGCTTAAAAAGGGGCCTTCCTTATAGAGGAAAACCGAAGTATCATTCATTATTCATAAATTGTGGAGGAACAGAAATTGACTATGAGGGAAATACATATGAAGATGACATGAATCCTGCGGGCATCTCATTATTCTCTCTTCGTGATGATAGATGGGCTTGTAGTAGCACAGGAGTATTCATCGAAACATTTGATGATAATTTCACAGCAACAATTGGTTCAAGCTTCTATCAAACAGCTCGTGTTTCCCCTTTATCTCTCAAGTATCATGGCCTCTGTATGATTAATGGCAGATACAATGTCAAGCTACACTTTGCTGAGATTATGTATTCTCATGACAAAAGTTTCATTAGCCTTGGAAGGCGCGTATTTGATGTTTCAATTCAAGGTACAAAATATTTGCGTGACTTCAACATTATGAAGGAAGCTGGTGGTGTTGGTAAGGGAATTGTTAGAGACTTTAATGTTGATGTCAATAATAACACCTTGGAGATTCATTTATACTGGGCTGAGAAAGGAACTACTGCAATCCCTAATGAAGGTGCATATGGCCCTCTTATATCTGCTATTTCAGTCACACCAAAATTCAAAATTCCTGGTGGGATTTCTACAGGAGCCATTGCTGGAATTGTGGTTGGATTATGTGTGTTCCTCATCATACCAATAGTGTTCATTCTTCGAAAGATGGGTTTTGTAGGTGGCAAAGATTCAATAGATAAACAATTTTTAGATCTAAAAACAGGTTATTTCTCTTTAAAACAAATCAAAGAGGCTACCAACAACTTTACCCCAGACAATAAGATTGGTGAAGGAGGTTTTGGACCGGTATACAAGGGTGTCCTATCAGATGGTGTTGTCATAGCTGTGAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAGTTGGAATGATATCTGCCTTGCAACACCCAAACCTTGTAAAGCTTTATGGTTGTTGCATTGAAGGAAATCAGTTGTTGCTGATATATGAGTACATGGATAACAACAGTCTTGCTGGTGCTCTTTTTGGTGGCCAAGGAAAAAACATACCCTTGAACTGGCCTACAAGAATGAAAATATGTGTTGGCATAGCAAGAGGTTTAGCTTTTCTTCACGAGGAATCAAGGTTGAAAATTGTACATAGGGATATTAAGGCAACAAATGTCTTACTTGATAAGGATCTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAGCTTGACGAAGATGAGAATACTCATATTAGCACAAGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGATAAAGCAGATGTTTACAGCTTCGGTGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGTAATACAAGTTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTTCAAGAGCAAGGAAATCTTATTGAGCTGGTGGATTCAAATTTGGGTTCAAGCTACTCATCACATGAAGCCATGATAATGTTGGAGGTGGCACTCCTATGTACTAACCCATCTCCAACTCTAAGACCATCCATGTCCTTTGTTGTTGGCATGCTTGAAGGAAAGTTGCCGATCCAAGCTCCGGTATTCAAGCATCGGCAGAGTGGCCAAGATGTGAGATTCAATGCCTTTGAGATACAATCAGCTGAAGGTAGCCATAATCAACAAACCTTTGATTCTTCTACAATATCACACCAAAGTTTGGAACAAAGAGTTGAAGCAATGGACTGTCCATCATCACAAGATAACCATAGCCAAACCTTAGTTTCTTCTTCATTCTCATGTAAAAGTGCAAAGCAAAGAGTTGAAGCAATGGATTAA 3177 0.3802 MEFGISSSKLFYLFIFGCFALNAFMDYESNAQLIPEDEVEVLKAISSKIQNLNWSVTPRSCIDGGFKNETINNVTCNCTFSNGKVCHVTHIDWSDNYLYGSIPRSFARLPLVALNLSYNKISGPIPKEMGEITTLEELRLRDNMLEGTLPSSLGKLKELRILDLSHNYLNGSIPESFARLPLVALDLSSNPISSPIPKEIGNITTLEELSLRDNMLEGTLPSSLGKLKQLRKLILSGNNFSGIMPESFGNMKKLEYIAIDGSNITGKLPNFIGNWTELYSMSLQGTSMEGPIPTAISQLTKLQRLAISDLHGPATMRFPNLEKLTSLEYLTLRNCSIHDSIPNYIGKMENLYFLDLSFNKLIGKIPDNISHLIHSRLSYMFLTENSLSGKIPGWILQDNSNYLDLSYNNFSETPILACQYNNVNLASSLSSSANTTHTCLKRGLPYRGKPKYHSLFINCGGTEIDYEGNTYEDDMNPAGISLFSLRDDRWACSSTGVFIETFDDNFTATIGSSFYQTARVSPLSLKYHGLCMINGRYNVKLHFAEIMYSHDKSFISLGRRVFDVSIQGTKYLRDFNIMKEAGGVGKGIVRDFNVDVNNNTLEIHLYWAEKGTTAIPNEGAYGPLISAISVTPKFKIPGGISTGAIAGIVVGLCVFLIIPIVFILRKMGFVGGKDSIDKQFLDLKTGYFSLKQIKEATNNFTPDNKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEVGMISALQHPNLVKLYGCCIEGNQLLLIYEYMDNNSLAGALFGGQGKNIPLNWPTRMKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLIELVDSNLGSSYSSHEAMIMLEVALLCTNPSPTLRPSMSFVVGMLEGKLPIQAPVFKHRQSGQDVRFNAFEIQSAEGSHNQQTFDSSTISHQSLEQRVEAMDCPSSQDNHSQTLVSSSFSCKSAKQRVEAMD 1058
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01150 1058 SMART serkin_6 700 967 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01150 1058 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 183 437 - -
Accr13g01150 1058 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 672 775 - -
Accr13g01150 1058 Pfam Malectin domain 455 628 IPR021720 -
Accr13g01150 1058 Gene3D Phosphorylase Kinase; domain 1 671 775 - -
Accr13g01150 1058 Gene3D Ribonuclease Inhibitor 313 439 IPR032675 -
Accr13g01150 1058 Gene3D Ribonuclease Inhibitor 200 312 IPR032675 -
Accr13g01150 1058 Pfam Leucine rich repeat 205 264 IPR001611 GO:0005515
Accr13g01150 1058 Pfam Leucine rich repeat 134 192 IPR001611 GO:0005515
Accr13g01150 1058 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Accr13g01150 1058 Gene3D - 453 633 - -
Accr13g01150 1058 FunFam Putative LRR receptor-like serine/threonine-protein kinase 776 983 - -
Accr13g01150 1058 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 108 182 - -
Accr13g01150 1058 Gene3D Transferase(Phosphotransferase) domain 1 776 989 - -
Accr13g01150 1058 SUPERFAMILY RNI-like 84 416 - -
Accr13g01150 1058 ProSitePatterns Serine/Threonine protein kinases active-site signature. 822 834 IPR008271 GO:0004672|GO:0006468
Accr13g01150 1058 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 42 180 - -
Accr13g01150 1058 CDD STKc_IRAK 706 973 - -
Accr13g01150 1058 ProSiteProfiles Protein kinase domain profile. 700 982 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01150 1058 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 452 633 - -
Accr13g01150 1058 Pfam Protein tyrosine and serine/threonine kinase 703 968 IPR001245 GO:0004672|GO:0006468
Accr13g01150 1058 SMART LRR_typ_2 156 179 IPR003591 -
Accr13g01150 1058 SMART LRR_typ_2 324 347 IPR003591 -
Accr13g01150 1058 SMART LRR_typ_2 227 250 IPR003591 -
Accr13g01150 1058 SMART LRR_typ_2 348 372 IPR003591 -
Accr13g01150 1058 SUPERFAMILY Protein kinase-like (PK-like) 683 972 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01150 Accr-Chr13 14526701 14538766 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01150 1 1046 Receptor kinase-like Gene Family AT1G53440 51.911 0.0 1038
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01150 PK_Tyr_Ser-Thr 2.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01150 - - gmx:121173337 1196.03