Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01149 ATGGAGTTTGGGATTTCAAGCTCTAAACTTTTCTACCTCTTCATATTTGGATGCTTCGCTTTGAATGCTTTCATGGACTATGAATCCAATGCTCAACTCATTCCAGAAGATGAAGTGGAAGTTTTAAAAGCAATATCATCGAAGATACAGAACTTGAATTGGAGCGTGACCCCACGTTCTTGTATTGATGGAGGCTTCAAAAATGAAACCATTAATAATGTAACATGCAATTGCACTTTCTCAAATGGAAAAGTTTGTCATGTTACACATATCTTTATGACAGGTCTCAATATATCTGGATTTTTACCAAGTGAATTTGGATACCTTATCCATTTGCAACAACTTGATTGGTCTGACAATTATCTGTATGGATCAATCCCAAGGAGCTTTGCTAGACTCCCTCTTGTTGCATTAAACCTTTCGTATAACAAAATCTCTGGTCCAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTAAGATTGAGAGATAATATGCTAGAAGGAACTCTTCCTTCTAGTCTCGGGAAATTGAAGGAATTACGCATACTTGATTTGTCACACAATTATCTAAATGGATCAATTCCGGAGAGCTTTGCTAGACTCCCTCTTGTTGCATTAGACCTTTCGAGTAACCCAATCTCTAGTCCAATTCCAAAGGAAATTGGCAATATTACAACTTTGGAGGAGTTAAGCTTGAGAGATAATATGCTTGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGCAATTACGCAAACTGATTCTTTCTGGAAATAACTTCTCAGGGATAATGCCCGAAAGTTTTGGCAATATGAAGAAACTAGAATATATTGCCATAGATGGGAGCAACATAACAGGGAAATTACCTAATTTTATTGGGAATTGGACCGAACTTTATAGCATGTCTTTACAGGGAACATCTATGGAAGGCCCCATTCCTACAGCTATATCTCAATTAACAAAATTGCAAAGATTGGCCATATCTGATTTGCATGGACCAGCGACAATGAGATTTCCTAATCTGGAAAAGTTGACATCATTAGAATACTTGACGTTGAGAAATTGCTCCATCCATGATTCCATTCCAAATTATATTGGTAAAATGGAAAACTTATATTTTCTAGATTTGAGCTTCAACAAGTTGATCGGTAAAATCCCAGACAACATAAGTCACTTGATCCATTCAAGGCTATCGTACATGTTTCTAACTGAAAATTCTCTCAGTGGAAAAATTCCTGGATGGATACTGCAAGACAACAGTAATTATTTGGATCTATCTTACAACAATTTTTCGGAGACACCTATACTTGCTTGTCAGTATAATAATGTAAACTTGGCCTCAAGCCTATCATCTTCAGCAAACACCACACATACCTGCTTAAAAAGGGGCCTTCCTTATAGAGGAAAACCGAAGTATCATTCATTATTCATAAATTGTGGAGGAACAGAAATTGACTATGAGGGAAATACATATGAAGATGACATGAATCCTGCGGGCATCTCATTATTCTCTCTTCGTGATGATAGATGGGCTTGTAGTAGCACAGGAGTATTCATCGAAACATTTGATGATAATTTCACAGCAACAATTGGTTCAAGCTTCTATCAAACAGCTCGTGTTTCCCCTTTATCTCTCAAGTATCATGGCCTCTGTATGATTAATGGCAGATACAATGTCAAGCTACACTTTGCTGAGATTATGTATTCTCATGACAAAAGTTTCATTAGCCTTGGAAGGCGCGTATTTGATGTTTCAATTCAAGGTACAAAATATTTGCGTGACTTCAACATTATGAAGGAAGCTGGTGGTGTTGGTAAGGGAATTGTTAGAGACTTTAATGTTGATGTCAATAATAACACCTTGGAGATTCATTTATACTGGGCTGAGAAAGGAACTACTGCAATCCCTAATGAAGGTGCATATGGCCCTCTTATATCTGCTATTTCAGTCACACCAAAATTCAAAATTCCTGGTGGGATTTCTACAGGAGCCATTGCTGGAATTGTGGTTGGATTATGTGTGTTCCTCATCATACCAATAGTGTTCATTCTTCGAAAGATGGGTTTTGTAGGTGGCAAAGATTCAATAGATAAACAATTTTTAGATCTAAAAACAGGTTATTTCTCTTTAAAACAAATCAAAGAGGCTACCAACAACTTTACCCCAGACAATAAGATTGGTGAAGGAGGTTTTGGACCGGTATACAAGGGTGTCCTATCAGATGGTGTTGTCATAGCTGTGAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAGTTGGAATGATATCTGCCTTGCAACACCCAAACCTTGTAAAGCTTTATGGTTGTTGCATTGAAGGAAATCAGTTGTTGCTGATATATGAGTACATGGATAACAACAGTCTTGCTGGTGCTCTTTTTGGTGGCCAAGGAAAAAACATACCCTTGAACTGGCCTACAAGAATGAAAATATGTGTTGGCATAGCAAGAGGTTTAGCTTTTCTTCACGAGGAATCAAGGTTGAAAATTGTACATAGGGATATTAAGGCAACAAATGTCTTACTTGATAAGGATCTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAGCTTGACGAAGATGAGAATACTCATATTAGCACAAGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGATAAAGCAGATGTTTACAGCTTCGGTGTTGTTGCTTTAGAAATTGTTAGTGGAAAAAGTAATACAAGTTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTTCAAGAGCAAGGAAATCTTATTGAGCTGGTGGATTCAAATTTGGGTTCAAGCTACTCATCACATGAAGCCATGATAATGTTGGAGGTGGCACTCCTATGTACTAACCCATCTCCAACTCTAAGACCATCCATGTCCTTTGTTGTTGGCATGCTTGAAGGAAAGTTGCCGATCCAAGCTCCGGTATTCAAGCATCGGCAGAGTGGCCAAGATGTGAGATTCAATGCCTTTGAGATACAATCAGCTGAAGGTAGCCATAATCAACAAACCTTTGATTCTTCTACAATATCACACCAAAGTTTGGAACAAAGAGTTGAAGCAATGGACTGTCCATCATCACAAGATAACCATAGCCAAACCTTAGTTTCTTCTTCATTCTCATGTAAAAGTGCAAAGCAAAGAGTTGAAGCAATGGATTAA 3249 0.3792 MEFGISSSKLFYLFIFGCFALNAFMDYESNAQLIPEDEVEVLKAISSKIQNLNWSVTPRSCIDGGFKNETINNVTCNCTFSNGKVCHVTHIFMTGLNISGFLPSEFGYLIHLQQLDWSDNYLYGSIPRSFARLPLVALNLSYNKISGPIPKEMGEITTLEELRLRDNMLEGTLPSSLGKLKELRILDLSHNYLNGSIPESFARLPLVALDLSSNPISSPIPKEIGNITTLEELSLRDNMLEGTLPSSLGKLKQLRKLILSGNNFSGIMPESFGNMKKLEYIAIDGSNITGKLPNFIGNWTELYSMSLQGTSMEGPIPTAISQLTKLQRLAISDLHGPATMRFPNLEKLTSLEYLTLRNCSIHDSIPNYIGKMENLYFLDLSFNKLIGKIPDNISHLIHSRLSYMFLTENSLSGKIPGWILQDNSNYLDLSYNNFSETPILACQYNNVNLASSLSSSANTTHTCLKRGLPYRGKPKYHSLFINCGGTEIDYEGNTYEDDMNPAGISLFSLRDDRWACSSTGVFIETFDDNFTATIGSSFYQTARVSPLSLKYHGLCMINGRYNVKLHFAEIMYSHDKSFISLGRRVFDVSIQGTKYLRDFNIMKEAGGVGKGIVRDFNVDVNNNTLEIHLYWAEKGTTAIPNEGAYGPLISAISVTPKFKIPGGISTGAIAGIVVGLCVFLIIPIVFILRKMGFVGGKDSIDKQFLDLKTGYFSLKQIKEATNNFTPDNKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEVGMISALQHPNLVKLYGCCIEGNQLLLIYEYMDNNSLAGALFGGQGKNIPLNWPTRMKICVGIARGLAFLHEESRLKIVHRDIKATNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTSYRPKEEFVYLLDWAYVLQEQGNLIELVDSNLGSSYSSHEAMIMLEVALLCTNPSPTLRPSMSFVVGMLEGKLPIQAPVFKHRQSGQDVRFNAFEIQSAEGSHNQQTFDSSTISHQSLEQRVEAMDCPSSQDNHSQTLVSSSFSCKSAKQRVEAMD 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01149 1082 FunFam Putative LRR receptor-like serine/threonine-protein kinase 800 1007 - -
Accr13g01149 1082 SUPERFAMILY Protein kinase-like (PK-like) 707 996 IPR011009 -
Accr13g01149 1082 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 696 799 - -
Accr13g01149 1082 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 476 657 - -
Accr13g01149 1082 Gene3D Ribonuclease Inhibitor 340 464 IPR032675 -
Accr13g01149 1082 Gene3D Ribonuclease Inhibitor 245 339 IPR032675 -
Accr13g01149 1082 Gene3D Phosphorylase Kinase; domain 1 695 799 - -
Accr13g01149 1082 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 15 204 - -
Accr13g01149 1082 Gene3D Ribonuclease Inhibitor 66 244 IPR032675 -
Accr13g01149 1082 CDD STKc_IRAK 730 997 - -
Accr13g01149 1082 Pfam Protein tyrosine and serine/threonine kinase 727 992 IPR001245 GO:0004672|GO:0006468
Accr13g01149 1082 ProSiteProfiles Protein kinase domain profile. 724 1006 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01149 1082 ProSitePatterns Serine/Threonine protein kinases active-site signature. 846 858 IPR008271 GO:0004672|GO:0006468
Accr13g01149 1082 Pfam Leucine rich repeat 158 216 IPR001611 GO:0005515
Accr13g01149 1082 Pfam Leucine rich repeat 229 288 IPR001611 GO:0005515
Accr13g01149 1082 Gene3D Transferase(Phosphotransferase) domain 1 800 1013 - -
Accr13g01149 1082 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 104 201 - -
Accr13g01149 1082 SMART serkin_6 724 991 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01149 1082 Gene3D - 477 657 - -
Accr13g01149 1082 SUPERFAMILY RNI-like 93 441 - -
Accr13g01149 1082 Pfam Malectin domain 479 652 IPR021720 -
Accr13g01149 1082 SMART LRR_typ_2 348 371 IPR003591 -
Accr13g01149 1082 SMART LRR_typ_2 180 203 IPR003591 -
Accr13g01149 1082 SMART LRR_typ_2 251 274 IPR003591 -
Accr13g01149 1082 SMART LRR_typ_2 372 396 IPR003591 -
Accr13g01149 1082 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 206 460 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01149 Accr-Chr13 14526701 14538766 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01149 1 1070 Receptor kinase-like Gene Family AT1G53440 50.549 0.0 1013
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01149 PK_Tyr_Ser-Thr 2.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01149 - - gmx:121173337 1172.15