Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01148 ATGGAGTTTGGGATTTCAAGTTCTAAACTTTTCTACCTCTTCATATTTGGATGCTTCGCAGTGGATGCTTTCATGGACTATGAATCCAATGCTCAACTCATTCCAGAAGATGAAGTGAAAGTTTTAAAAGCAATATCATCGAAGATAGAGAACTTGAATTGGAGCGTGACCCCACGTTCTTGTATTGATGGAGGCTTCAAAAATGAAACCATTAATGAAGAGGAGGACATCAAAAGGAATGTAACATGCAATTGCACTTTCTCAAATGGAACAGTTTGTCATGTTACACATATTGTTATGACAGGTCTCAATGTATCTGGATTTTTACCAAGTGAATTTGGATATCTTATCCATCTACAACAACTTGATTTGTCTTACAATTATCTAAGTGGATCAATCCCAAGGAGCTTTTCTAGACTCCCTCTTGTTGCATTAAAGCTTTCGGGTAACCCAATCTCTGGTCCAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTAATATTGAGAGATAATCTGCTAGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGGAATTACGCGTACTGGTTCTTTCTGGAAATAACTTCTCAGGGACAATACCCAAAAGTTTTAGCAATATGAAGAAACTAGAATCTATTGAATTGGATGGGAGCAACATAACAGGGAAATTACCCAATTTTATCAGGAATTGGACTGAACTTTATAGGATGCATTTAAGAGGAACATCTATGGAAGGCCCCATTCCTACAGCTATATCTCAATTAACAAAATTGAAATATTTGATCATATCTGATTTGCATGGACCAGCGACAATGAGATTTCCTAATCTGGAAAATTTGACATCATTAAAATACTTAGATTTGAGCTTCAACAAGTTGATCGGTGAAATCCCAAACGATATAGCTGGTGACTTGATCCATCATCTAAAGCACATGTTTCTAACTGCAAATTCTCTCAGTGGAAAAATTCCTGAATGGATACTGCAAGACAAATATGATTTTTTTGATCTATCTTACAACAATTTCTCGGAGATAGATGCAACTGTTTGTCAGTACAATAATGTAAACTTGGCCTCAAGCCTATCATCTTCAGCAAGCCTATCATCTTCAGCAGACACCACATGTACCTACTTAAAAAGGGGCATTCCTTGTGACGGAAAACCTAAGTATCATTCATTATTCATAAATTGTGGAGGACCAGAAATTGAATATAAGGGGAATAAATATGAAGATAACACTAGTCCTGAGGGTTACTCATTCTTTTTTCATAGTGGTGATAAATGGGCTTATAGCAACACAGGAGTATACATTGAAAGACATGCTAATCCTTTCATAGCAACAAATAGATTTTCCCTCAATATTATTGGTCCAAGCTTCTACCAAACAGCTCGTGTTTCCCCTTTATCTCTCAAGTATTATGGCCTCTGTATGATTGGTGGCAATTACAATGTCAAGCTACATTTTGCTGAGATTATGTATTCTCATGACAAAAATTTCAGCAGCCTTGGAAGGCGCTTATTTGATGTTTCAATTCAAGGTAGGAAATATTTGCGTGACTTCAACATTATGAAGGAAGCTGGTGGCGTTGGGAAGGGCATTGTTAAAGACTTTAACGTTGATGTCAATGATAACACCTTGGAGATTCATTTATACTGGGCTGGGAAAGGAACTACTACAATCCCTAATAAAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACACCAAACTTCAAAATTCCTGGGAAATCTGCGGGAGCTATTGTTGGAATTGTGGTTGGATCATGTGTATTCCTCATCATATCAATAGTATTCATTCTTCGAAAGATGGGTTTTGTAGGTGGCAAAGATTCAAAAGATAGACAATTTTTAGATCTGAAAACGGGCTATTTCTCTTTAAAACAAATCAAAGATGCCACCAACAACTTTGCCCTAAAAAATAAGATTGGTGAAGGAGGTTTTGGACCAGTATACAAGGGTGTACTATCAGATGGTGTTGTCATAGCTGTGAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAGTTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAGCTTTATGGTTGTTGCGTTGAAGGAAATCAGTTGTTGCTGATATATGAGTACATGGATAACAACAGTCTTGCTGGTGCTCTTTTTGGTGGCCAAGGACGAAAAATACCCTTGGACTGGCCTTCAAGAATGAAAATATGTGTAGGCATAGCAAGAGGCTTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGAGATATTAAGACAACAAATGTCTTACTTGATAAGGATTTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAGCTTGATGAAGATGAGAATACTCATATTAGCACAAGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGATAAAGCAGATGTTTACAGCTTTGGTGTTGTTGCTATAGAAATTGTTAGTGGAAAAAGCAATGCAAGTTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTTCAAGAGCAAGGAAATCTTATTGAGCTGGTGGATCCAAATTTGGGTTCAAGCTACTCATCACATGAAGCCATGATAATGTTGGAGGTGGCACTCCTATGTACTAACCTATCTCCAACTCTAAGACCATCCATGTCCTCTGTTGTTGGCATGCTTGAAGGAAAGTTGCCAATCCAAGCGCCGGTAATCAAGCATCAGCAGAGTGGCCAAAATGCGAGATTCAATGCCTTTGAGATACAATCAGTTGAAGGTAGCCATAGTCAAACCTTTGATTCTTCTATAAAATCACACCAAAGTGTGGAGCAAAGAGTTGAAGCAATGGATTGTCCACCATCACAAGATAACCACAGCCAAACCTTAGCTTCTTCTTCATTCTCATGA 2982 0.3789 MEFGISSSKLFYLFIFGCFAVDAFMDYESNAQLIPEDEVKVLKAISSKIENLNWSVTPRSCIDGGFKNETINEEEDIKRNVTCNCTFSNGTVCHVTHIVMTGLNVSGFLPSEFGYLIHLQQLDLSYNYLSGSIPRSFSRLPLVALKLSGNPISGPIPKEMGEITTLEELILRDNLLEGTLPSSLGKLKELRVLVLSGNNFSGTIPKSFSNMKKLESIELDGSNITGKLPNFIRNWTELYRMHLRGTSMEGPIPTAISQLTKLKYLIISDLHGPATMRFPNLENLTSLKYLDLSFNKLIGEIPNDIAGDLIHHLKHMFLTANSLSGKIPEWILQDKYDFFDLSYNNFSEIDATVCQYNNVNLASSLSSSASLSSSADTTCTYLKRGIPCDGKPKYHSLFINCGGPEIEYKGNKYEDNTSPEGYSFFFHSGDKWAYSNTGVYIERHANPFIATNRFSLNIIGPSFYQTARVSPLSLKYYGLCMIGGNYNVKLHFAEIMYSHDKNFSSLGRRLFDVSIQGRKYLRDFNIMKEAGGVGKGIVKDFNVDVNDNTLEIHLYWAGKGTTTIPNKGVYGPLISAISVTPNFKIPGKSAGAIVGIVVGSCVFLIISIVFILRKMGFVGGKDSKDRQFLDLKTGYFSLKQIKDATNNFALKNKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEVGMISALQHPNLVKLYGCCVEGNQLLLIYEYMDNNSLAGALFGGQGRKIPLDWPSRMKICVGIARGLAYLHEESRLKIVHRDIKTTNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVAIEIVSGKSNASYRPKEEFVYLLDWAYVLQEQGNLIELVDPNLGSSYSSHEAMIMLEVALLCTNLSPTLRPSMSSVVGMLEGKLPIQAPVIKHQQSGQNARFNAFEIQSVEGSHSQTFDSSIKSHQSVEQRVEAMDCPPSQDNHSQTLASSSFS 993
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01148 993 SMART serkin_6 648 919 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01148 993 SUPERFAMILY L domain-like 89 346 - -
Accr13g01148 993 Gene3D Ribonuclease Inhibitor 272 363 IPR032675 -
Accr13g01148 993 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
Accr13g01148 993 Gene3D Ribonuclease Inhibitor 64 205 IPR032675 -
Accr13g01148 993 ProSitePatterns Serine/Threonine protein kinases active-site signature. 770 782 IPR008271 GO:0004672|GO:0006468
Accr13g01148 993 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 950 - -
Accr13g01148 993 Gene3D Ribonuclease Inhibitor 206 271 IPR032675 -
Accr13g01148 993 ProSiteProfiles Protein kinase domain profile. 648 930 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01148 993 MobiDBLite consensus disorder prediction 974 993 - -
Accr13g01148 993 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 619 723 - -
Accr13g01148 993 FunFam Putative LRR receptor-like serine/threonine-protein kinase 724 931 - -
Accr13g01148 993 Pfam Leucine Rich Repeat 286 305 IPR001611 GO:0005515
Accr13g01148 993 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Accr13g01148 993 Pfam Malectin domain 397 577 IPR021720 -
Accr13g01148 993 PRINTS Leucine-rich repeat signature 284 297 - -
Accr13g01148 993 PRINTS Leucine-rich repeat signature 119 132 - -
Accr13g01148 993 Gene3D Transferase(Phosphotransferase) domain 1 724 942 - -
Accr13g01148 993 Gene3D Phosphorylase Kinase; domain 1 618 723 - -
Accr13g01148 993 SMART LRR_typ_2 284 308 IPR003591 -
Accr13g01148 993 SMART LRR_typ_2 116 139 IPR003591 -
Accr13g01148 993 SMART LRR_typ_2 187 210 IPR003591 -
Accr13g01148 993 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Accr13g01148 993 Pfam Protein tyrosine and serine/threonine kinase 650 916 IPR001245 GO:0004672|GO:0006468
Accr13g01148 993 Gene3D - 395 582 - -
Accr13g01148 993 SUPERFAMILY Protein kinase-like (PK-like) 632 920 IPR011009 -
Accr13g01148 993 MobiDBLite consensus disorder prediction 978 993 - -
Accr13g01148 993 CDD STKc_IRAK 654 921 - -
Accr13g01148 993 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 394 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01148 Accr-Chr13 14444114 14454765 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01148 1 977 Receptor kinase-like Gene Family AT1G53440 53.406 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01148 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01148 - - gmx:100817368 1217.99