Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01147 ATGGAGTTTGGGATTTCAAGTTCTAAACTTTTCTACCTCTTCATATTTGGATGCTTCGCAGTGGATGCTTTCATGGACTATGAATCCAATGCTCAACTCATTCCAGAAGATGAAGTGAAAGTTTTAAAAGCAATATCATCGAAGATAGAGAACTTGAATTGGAGCGTGACCCCACGTTCTTGTATTGATGGAGGCTTCAAAAATGAAACCATTAATGAAGAGGAGGACATCAAAAGGAATGTAACATGCAATTGCACTTTCTCAAATGGAACAGTTTGTCATGTTACACATATTGTTATGACAGGTCTCAATGTATCTGGATTTTTACCAAGTGAATTTGGATATCTTATCCATCTACAACAACTTGATTTGTCTTACAATTATCTAAGTGGATCAATCCCAAGGAGCTTTTCTAGACTCCCTCTTGTTGCATTAAAGCTTTCGGGTAACCCAATCTCTGGTCCAATTCCAAAGGAAATGGGTGAAATTACAACTTTGGAGGAGTTAATATTGAGAGATAATCTGCTAGAAGGAACTCTTCCTTCTAGTCTTGGAAAATTGAAGGAATTACGCGTACTGGTTCTTTCTGGAAATAACTTCTCAGGGACAATACCCAAAAGTTTTAGCAATATGAAGAAACTAGAATCTATTGAATTGGATGGGAGCAACATAACAGGGAAATTACCCAATTTTATCAGGAATTGGACTGAACTTTATAGGATGCATTTAAGAGGAACATCTATGGAAGGCCCCATTCCTACAGCTATATCTCAATTAACAAAATTGAAATATTTGATCATATCTGATTTGCATGGACCAGCGACAATGAGATTTCCTAATCTGGAAAATTTGACATCATTAAAATACTTGATGTTGAGAAATTGCTCCATCCATGATTCCATTCCTAATTATATTTATATTGGTAAACTGGAAAAATTATCTTATATAGATTTGAGCTTCAACAAGTTGATCGGTGAAATCCCAAACGATATAGCTGGTGACTTGATCCATCATCTAAAGCACATGTTTCTAACTGCAAATTCTCTCAGTGGAAAAATTCCTGAATGGATACTGCAAGACAAATATGATTTTTTTGATCTATCTTACAACAATTTCTCGGAGATAGATGCAACTGTTTGTCAGTACAATAATGTAAACTTGGCCTCAAGCCTATCATCTTCAGCAAGCCTATCATCTTCAGCAGACACCACATGTACCTACTTAAAAAGGGGCATTCCTTGTGACGGAAAACCTAAGTATCATTCATTATTCATAAATTGTGGAGGACCAGAAATTGAATATAAGGGGAATAAATATGAAGATAACACTAGTCCTGAGGGTTACTCATTCTTTTTTCATAGTGGTGATAAATGGGCTTATAGCAACACAGGAGTATACATTGAAAGACATGCTAATCCTTTCATAGCAACAAATAGATTTTCCCTCAATATTATTGGTCCAAGCTTCTACCAAACAGCTCGTGTTTCCCCTTTATCTCTCAAGTATTATGGCCTCTGTATGATTGGTGGCAATTACAATGTCAAGCTACATTTTGCTGAGATTATGTATTCTCATGACAAAAATTTCAGCAGCCTTGGAAGGCGCTTATTTGATGTTTCAATTCAAGGTAGGAAATATTTGCGTGACTTCAACATTATGAAGGAAGCTGGTGGCGTTGGGAAGGGCATTGTTAAAGACTTTAACGTTGATGTCAATGATAACACCTTGGAGATTCATTTATACTGGGCTGGGAAAGGAACTACTACAATCCCTAATAAAGGTGTATATGGACCTCTTATATCTGCTATTTCAGTCACACCAAACTTCAAAATTCCTGGGAAATCTGCGGGAGCTATTGTTGGAATTGTGGTTGGATCATGTGTATTCCTCATCATATCAATAGTATTCATTCTTCGAAAGATGGGTTTTGTAGGTGGCAAAGATTCAAAAGATAGACAATTTTTAGATCTGAAAACGGGCTATTTCTCTTTAAAACAAATCAAAGATGCCACCAACAACTTTGCCCTAAAAAATAAGATTGGTGAAGGAGGTTTTGGACCAGTATACAAGGGTGTACTATCAGATGGTGTTGTCATAGCTGTGAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGTGAATTTGTTAATGAAGTTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAAAGCTTTATGGTTGTTGCGTTGAAGGAAATCAGTTGTTGCTGATATATGAGTACATGGATAACAACAGTCTTGCTGGTGCTCTTTTTGGTGGCCAAGGACGAAAAATACCCTTGGACTGGCCTTCAAGAATGAAAATATGTGTAGGCATAGCAAGAGGCTTAGCTTATCTTCATGAGGAATCAAGGTTGAAAATTGTGCATAGAGATATTAAGACAACAAATGTCTTACTTGATAAGGATTTGAATGCCAAGATCTCAGACTTTGGCTTAGCCAAGCTTGATGAAGATGAGAATACTCATATTAGCACAAGAATAGCTGGAACAATTGGTTACATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGATAAAGCAGATGTTTACAGCTTTGGTGTTGTTGCTATAGAAATTGTTAGTGGAAAAAGCAATGCAAGTTATAGGCCAAAAGAGGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTTCAAGAGCAAGGAAATCTTATTGAGCTGGTGGATCCAAATTTGGGTTCAAGCTACTCATCACATGAAGCCATGATAATGTTGGAGGTGGCACTCCTATGTACTAACCTATCTCCAACTCTAAGACCATCCATGTCCTCTGTTGTTGGCATGCTTGAAGGAAAGTTGCCAATCCAAGCGCCGGTAATCAAGCATCAGCAGAGTGGCCAAAATGCGAGATTCAATGCCTTTGAGATACAATCAGTTGAAGGTAGCCATAGTCAAACCTTTGATTCTTCTATAAAATCACACCAAAGTGTGGAGCAAAGAGTTGAAGCAATGGATTGTCCACCATCACAAGATAACCACAGCCAAACCTTAGCTTCTTCTTCATTCTCATGA 3060 0.3761 MEFGISSSKLFYLFIFGCFAVDAFMDYESNAQLIPEDEVKVLKAISSKIENLNWSVTPRSCIDGGFKNETINEEEDIKRNVTCNCTFSNGTVCHVTHIVMTGLNVSGFLPSEFGYLIHLQQLDLSYNYLSGSIPRSFSRLPLVALKLSGNPISGPIPKEMGEITTLEELILRDNLLEGTLPSSLGKLKELRVLVLSGNNFSGTIPKSFSNMKKLESIELDGSNITGKLPNFIRNWTELYRMHLRGTSMEGPIPTAISQLTKLKYLIISDLHGPATMRFPNLENLTSLKYLMLRNCSIHDSIPNYIYIGKLEKLSYIDLSFNKLIGEIPNDIAGDLIHHLKHMFLTANSLSGKIPEWILQDKYDFFDLSYNNFSEIDATVCQYNNVNLASSLSSSASLSSSADTTCTYLKRGIPCDGKPKYHSLFINCGGPEIEYKGNKYEDNTSPEGYSFFFHSGDKWAYSNTGVYIERHANPFIATNRFSLNIIGPSFYQTARVSPLSLKYYGLCMIGGNYNVKLHFAEIMYSHDKNFSSLGRRLFDVSIQGRKYLRDFNIMKEAGGVGKGIVKDFNVDVNDNTLEIHLYWAGKGTTTIPNKGVYGPLISAISVTPNFKIPGKSAGAIVGIVVGSCVFLIISIVFILRKMGFVGGKDSKDRQFLDLKTGYFSLKQIKDATNNFALKNKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFVNEVGMISALQHPNLVKLYGCCVEGNQLLLIYEYMDNNSLAGALFGGQGRKIPLDWPSRMKICVGIARGLAYLHEESRLKIVHRDIKTTNVLLDKDLNAKISDFGLAKLDEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVAIEIVSGKSNASYRPKEEFVYLLDWAYVLQEQGNLIELVDPNLGSSYSSHEAMIMLEVALLCTNLSPTLRPSMSSVVGMLEGKLPIQAPVIKHQQSGQNARFNAFEIQSVEGSHSQTFDSSIKSHQSVEQRVEAMDCPPSQDNHSQTLASSSFS 1019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01147 1019 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 203 - -
Accr13g01147 1019 SMART serkin_6 674 945 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01147 1019 SUPERFAMILY Protein kinase-like (PK-like) 658 946 IPR011009 -
Accr13g01147 1019 Gene3D Ribonuclease Inhibitor 206 271 IPR032675 -
Accr13g01147 1019 Pfam Leucine rich repeat 165 224 IPR001611 GO:0005515
Accr13g01147 1019 Gene3D Ribonuclease Inhibitor 65 205 IPR032675 -
Accr13g01147 1019 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 420 608 - -
Accr13g01147 1019 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 976 - -
Accr13g01147 1019 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 645 749 - -
Accr13g01147 1019 SMART LRR_typ_2 284 308 IPR003591 -
Accr13g01147 1019 SMART LRR_typ_2 116 139 IPR003591 -
Accr13g01147 1019 SMART LRR_typ_2 187 210 IPR003591 -
Accr13g01147 1019 SMART LRR_typ_2 310 334 IPR003591 -
Accr13g01147 1019 FunFam Putative LRR receptor-like serine/threonine-protein kinase 750 957 - -
Accr13g01147 1019 MobiDBLite consensus disorder prediction 1000 1019 - -
Accr13g01147 1019 Pfam Malectin domain 423 603 IPR021720 -
Accr13g01147 1019 MobiDBLite consensus disorder prediction 1004 1019 - -
Accr13g01147 1019 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515
Accr13g01147 1019 Gene3D Transferase(Phosphotransferase) domain 1 750 968 - -
Accr13g01147 1019 SUPERFAMILY L domain-like 90 366 - -
Accr13g01147 1019 Pfam Protein tyrosine and serine/threonine kinase 676 942 IPR001245 GO:0004672|GO:0006468
Accr13g01147 1019 ProSitePatterns Serine/Threonine protein kinases active-site signature. 796 808 IPR008271 GO:0004672|GO:0006468
Accr13g01147 1019 ProSiteProfiles Protein kinase domain profile. 674 956 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01147 1019 CDD STKc_IRAK 680 947 - -
Accr13g01147 1019 Gene3D Ribonuclease Inhibitor 272 399 IPR032675 -
Accr13g01147 1019 Gene3D Phosphorylase Kinase; domain 1 644 749 - -
Accr13g01147 1019 Gene3D - 421 608 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01147 Accr-Chr13 14444114 14454765 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01147 1 1003 Receptor kinase-like Gene Family AT1G53440 54.142 0.0 1074
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01147 PK_Tyr_Ser-Thr 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01147 - - gmx:100817368 1251.11