Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01138 ATGGAATTTGTGATTTCAGGCTCTAAACTTTTCTATGTTTTTGTATTTGGATGCTTCGCTTTGAATGCTTTCGCAGACTATGAATCCACTCAACTCATACCAGAAGATGAAGTGAAAGCTCTGAAAGCAATATCATCCACAATAGAGAACTTAAATTGGAATGTGACCCCACATTCTTGTTTCGATGGAGGATTCAAAAATAAGACCTTTGATGGAAAAATGAACACCATAAGGCATGTAACATGCAATTGCAGTTTCTCATACGGAAGAGTTTGCCATGTTGATAATATCCGTATGACGGGTCTTAATCTATCTGGAATTTTACCAAGTGAATTTGAGTACCTTACCCATCTAGAAACACTGGATCTCTCTCGCAATTGTCTATATGGATCAATCCCAGGGATCTTTGCTAAACTCCCTCTTATTGAACTAAATCTTATGGGTAACCAAATCAGTGGTCCAATTCCAAATGAAATTGGTGAAATTACAACTTTGGAGTATTTAGAGTTAGGTGATAATCTGTTAGAAGGAACTCTTCCTTCTAGTCTCGGAAAATTGGAGCAGTTAGAAACATTGAGTCTTTCTGGAAATAATTTCTCAGGGACAATACCCAAAAGTTTTGCCAACCTGAAGAATCTAAGATATATGTCATTAGATGGGAACAATATAACAGGAAAAATACCCCATTTTATTGGGAATTTGACATCACTTCGTCAGCTGAATTTACAAGGAACGTCTATGGAAGGCCCGATTCCTACAACTATATCTCTATTAAAAAATTTGTCCGTGTTGAGAATATCTGATTTGCATGGACCAGCGACAATGACATTTCCTAATCTGGAGAATTTGACAAACTTGGAAATCCTGGTATTGAGAAATTGTTCAATCCATGATTCCATACCAAATTACATTTTTAATTATACGGATTATGAATTTAATCTTCTAGATTTGAGCTTCAACAAATTGATTGGTGAAATCCCAAACAATATGAGTGCATATCCCTACCTAGATTTCATGTTTCTCACTGAAAATTCTCTAAGTGGAAAAATTCCTGAATGGATACTGCAAAACAAAGATGCTTATTTTGATCTATCTTACAACAACTTTTCAGAGACTTCTGCACCTACTTGTCAATATTATAATATAAATTTGGCTTCGAGCCTATCATCTTCAGCAAACACCTCACGTACTTGCCAGAAAAGGGGACTTCCTTGTGGAGGAAAACCCAAGTATAGTTCAATGTTCATAAATTGTGGAGGGGAAGAAATTGAATATGAGGGGAATAAATATGAAGACGACGTCAATCCTGGGGGTATCTCTTGTTTTTCTGCTAGCGAAGATAAATGGGCTTATAGTAGCACAGGACTATACTCCAATAATGATGATACTAATAACATTGCAACAAACAAATATTCTCTCAACATTACTGGTCCAAGATTCTACCAAACAGCTCGCATTTCCTTATTGTCTCTAAAGTACCATGGCCTCTGTATGATTAATGGAAATTACAACGTCAAGCTCCACTTTGCAGAGATTATGTTCACTCATGACCAAAATTTCAGCAGCCATGGAAGACGCATATTTGATGTTTCAATTCAAGGTCGGTTATGTTTGAGTGATTTCAACATTATGAAAGAAGCTAATGGCACTGGTAAGGGCATAGTCAAGGACTTTAACGTTGATGTCAATGATAACACCTTGGAGATTCATTTATATTGGGCTGGGAAAGGAACTATGTCTATTCCTGATGATTATGTTTTTGGACCTCTTATATCTGCTATATCAATCACCCCAAACTTCAAACTTCCTACAGAAAGGCATTTAGGCGCTGGAGCCATTGCTGGAATTGTAGTTGGATCATGTGTGTTCCTTATCATGCTAATAATATTCGTTTTTCAAAAGATGGGTTTTCTAGGTGGCAAAGATTCAAAAGACAAGCAGCTTTTAGATCTAAAAATAGGTTATTTCTCTTTAAAACAAATCAAAAATGCCACTAACAACTTTGCCCCAGAAAATAAGATTGGTGAAGGAGGCTTTGGACCAGTGTACAAGGGTGTACTATCAGATGGTGTTGTCATAGCTGTGAAGCAGCTTTCCTCCAAATCAAAGCAAGGGAATCGTGAATTTATTAATGAAATTGGAATGATATCTGCTTTGCAACACCCAAACCTTGTAGAACTCTATGGTTGTTGTGTTGAAGGAAACCAGTTGTTGTTGATATATGAGTACATGGAGAACAATAGTCTTGCTAGTGCTCTTTTTGGTGGCGTTGGACGAAAAATACACTTGGACTGGCCTACAAGAATGAAAATATGTGTAGGGATAGCAAGAGGATTGGCTTATCTTCATGAAGAATCAAGATTGAAAATTGTTCATAGAGATATTAAGGCAACCAATGTCTTGCTTAGTAAAGATTTAAATGCCAAGATCTCAGACTTTGGTTTAGCCAAGCTCAATGAGGATGAGAATACTCATATTAGCACAAGAATAGCAGGAACAATTGGCTATATGGCTCCTGAATATGCAATGCGAGGATACTTGACTGACAAAGCAGATGTTTATAGTTTTGGAGTTGTTGCTTTAGAAATTGTTAGTGGGAAAAGCAACACAAGTCACAGGCCAAGAGAGGAGTTTGGTTATCTTCTTGACTGGGCCTATGTTCTTCAAGAGCAAAAAAACCTTCTTGAGCTAGTGGATCCAAATTTGGGTTCAAGCTACTCATCACATGAAGCCATGATAATGTTGGAGGTGGCACTCCTATGTAGTAACCCATCGCCAACTCTAAGACCATCCATGTCCTCTGTTGTTGGCATGCTTGAAGGAAAGCTGCCAATCCAAGCGCCGGTAAACAAGCATTGGCAGAGTGGTCAAGATGCGAGATTCAATGCCTTTGAGATACAGTCAATTGAAGGTAGCCATAGTCAAATCTTTAATTCTTCTACAAAATCACACCAAAGTGTGGAGCAAAGAGTTGAAGAAATGGATTGTCCATCATCACAAGATAACCACAGCCAAACCTTAGCTTCTTCTTCATTCTCATCTAACAATGCAAAGCAAGGAGTTGAAGCAATGGATGGTCCATCCACTGACTCCCTTATTTCCATTCCAAGTAAATATTTCTCTTCATCTAGTAGGCTTCTGAAAGATTTCTGCTAG 3156 0.3771 MEFVISGSKLFYVFVFGCFALNAFADYESTQLIPEDEVKALKAISSTIENLNWNVTPHSCFDGGFKNKTFDGKMNTIRHVTCNCSFSYGRVCHVDNIRMTGLNLSGILPSEFEYLTHLETLDLSRNCLYGSIPGIFAKLPLIELNLMGNQISGPIPNEIGEITTLEYLELGDNLLEGTLPSSLGKLEQLETLSLSGNNFSGTIPKSFANLKNLRYMSLDGNNITGKIPHFIGNLTSLRQLNLQGTSMEGPIPTTISLLKNLSVLRISDLHGPATMTFPNLENLTNLEILVLRNCSIHDSIPNYIFNYTDYEFNLLDLSFNKLIGEIPNNMSAYPYLDFMFLTENSLSGKIPEWILQNKDAYFDLSYNNFSETSAPTCQYYNINLASSLSSSANTSRTCQKRGLPCGGKPKYSSMFINCGGEEIEYEGNKYEDDVNPGGISCFSASEDKWAYSSTGLYSNNDDTNNIATNKYSLNITGPRFYQTARISLLSLKYHGLCMINGNYNVKLHFAEIMFTHDQNFSSHGRRIFDVSIQGRLCLSDFNIMKEANGTGKGIVKDFNVDVNDNTLEIHLYWAGKGTMSIPDDYVFGPLISAISITPNFKLPTERHLGAGAIAGIVVGSCVFLIMLIIFVFQKMGFLGGKDSKDKQLLDLKIGYFSLKQIKNATNNFAPENKIGEGGFGPVYKGVLSDGVVIAVKQLSSKSKQGNREFINEIGMISALQHPNLVELYGCCVEGNQLLLIYEYMENNSLASALFGGVGRKIHLDWPTRMKICVGIARGLAYLHEESRLKIVHRDIKATNVLLSKDLNAKISDFGLAKLNEDENTHISTRIAGTIGYMAPEYAMRGYLTDKADVYSFGVVALEIVSGKSNTSHRPREEFGYLLDWAYVLQEQKNLLELVDPNLGSSYSSHEAMIMLEVALLCSNPSPTLRPSMSSVVGMLEGKLPIQAPVNKHWQSGQDARFNAFEIQSIEGSHSQIFNSSTKSHQSVEQRVEEMDCPSSQDNHSQTLASSSFSSNNAKQGVEAMDGPSTDSLISIPSKYFSSSSRLLKDFC 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01138 1051 MobiDBLite consensus disorder prediction 975 1029 - -
Accr13g01138 1051 Pfam Protein tyrosine and serine/threonine kinase 671 937 IPR001245 GO:0004672|GO:0006468
Accr13g01138 1051 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 599 - -
Accr13g01138 1051 SUPERFAMILY L domain-like 277 378 - -
Accr13g01138 1051 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 639 743 - -
Accr13g01138 1051 ProSitePatterns Serine/Threonine protein kinases active-site signature. 790 802 IPR008271 GO:0004672|GO:0006468
Accr13g01138 1051 Gene3D Phosphorylase Kinase; domain 1 637 743 - -
Accr13g01138 1051 SUPERFAMILY L domain-like 70 308 - -
Accr13g01138 1051 SMART LRR_typ_2 186 209 IPR003591 -
Accr13g01138 1051 SMART LRR_typ_2 115 138 IPR003591 -
Accr13g01138 1051 SMART LRR_typ_2 283 307 IPR003591 -
Accr13g01138 1051 SMART LRR_typ_2 210 234 IPR003591 -
Accr13g01138 1051 SMART serkin_6 668 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01138 1051 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 141 394 - -
Accr13g01138 1051 Gene3D Ribonuclease Inhibitor 273 388 IPR032675 -
Accr13g01138 1051 Gene3D Ribonuclease Inhibitor 37 204 IPR032675 -
Accr13g01138 1051 Gene3D Ribonuclease Inhibitor 205 272 IPR032675 -
Accr13g01138 1051 Pfam Malectin domain 414 594 IPR021720 -
Accr13g01138 1051 SUPERFAMILY Protein kinase-like (PK-like) 651 940 IPR011009 -
Accr13g01138 1051 FunFam Putative LRR receptor-like serine/threonine-protein kinase 744 951 - -
Accr13g01138 1051 CDD STKc_IRAK 674 941 - -
Accr13g01138 1051 ProSiteProfiles Protein kinase domain profile. 668 943 IPR000719 GO:0004672|GO:0005524|GO:0006468
Accr13g01138 1051 Gene3D - 412 599 - -
Accr13g01138 1051 Pfam Leucine Rich Repeat 117 138 IPR001611 GO:0005515
Accr13g01138 1051 Pfam Leucine rich repeat 188 245 IPR001611 GO:0005515
Accr13g01138 1051 MobiDBLite consensus disorder prediction 998 1022 - -
Accr13g01138 1051 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 13 973 - -
Accr13g01138 1051 Gene3D Transferase(Phosphotransferase) domain 1 744 957 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01138 Accr-Chr13 14140259 14151244 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01138 1 1041 Receptor kinase-like Gene Family AT1G53440 54.000 0.0 1086
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Accr13g01138 PK_Tyr_Ser-Thr 1.8e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01138 - - gmx:100817368 1221.45