Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01131 ATGTGCCATATTCTCATCCTAGTCTCTGGATCTTCTGCTACAGATGTTGCCAAGCACCTCAAGGAGCAGCAGATGATGATGCTTGGGCACCAAGAGGCAACCTCAGAGACGGAGTTGAACCGATACATCCCAACGGCGGTGGCTTTCGGCGGCATTTGCATCGGAGCCTTGACGGGGTTGGCGGATTTTACGGGGGCGATTGGATCAGGGACTGGTATATTACTTGCAGTGACTACAATCTATCATTACTACGAGACATATGAGAAGGAGAAAGCAAGTCAGCTTGCAGTATTTGGCTTTTAA 303 0.4917 MCHILILVSGSSATDVAKHLKEQQMMMLGHQEATSETELNRYIPTAVAFGGICIGALTGLADFTGAIGSGTGILLAVTTIYHYYETYEKEKASQLAVFGF 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01131 100 PANTHER SECY/SEC61-ALPHA FAMILY MEMBER 5 94 IPR002208 GO:0015031|GO:0016020
Accr13g01131 100 Pfam SecY 8 84 IPR002208 GO:0015031|GO:0016020
Accr13g01131 100 SUPERFAMILY Preprotein translocase SecY subunit 6 90 IPR023201 -
Accr13g01131 100 Gene3D SecY subunit domain 1 98 IPR023201 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01131 Accr-Chr13 14011909 14013104 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01131 6 100 Miscellaneous Gene Families AT1G29310 76.842 4.90e-46 152
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01131 K10956 - aew:130783040 147.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Accr13g01131 13 14011909 14013104 Accr13g01131 13 14011909 14013104 ECH