Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Accr13g01112 ATGGGATCTCTAAACAAACAGGTTATTGGTGAATCAACAAGACTTATTAATGCTCAAACCCATATATGGAACCACACCTTCAGCTTCATCAACTCAATGTCCCTCAAATCTGCAATTGACTTGAACATCCCAGAAATCATTCACAAACATGGCAAGCCCATGCCTCTTCCTCTTCTCATCTCCTCCCTACAAATCCATCCCTCCAAGTCTCCGAACATTCATCGCTTAATGCGACTCCTCACCTACTCTGGCTTCTTCTGTCTCCAGAAACTTCCAGAATCTTCTGAAGAAGAAGATCAAGAAGGCTATGTCCTAACTGATTCTTCTACCCTTCTTCTTAAGGACCACCCGTTAAGCGCGACGCCGTTCTTCCTCGGTATGATCGATCAGGCGTTGAAGAAGCCGTGGTATGAGCTGACAAATTATCTCCAAAGTGATGAACCGTCGCCGTTTCACATGGCGTATGGGAGCAAGATTTGGGAGTGTGCTAAGGTGGATTCTAAGTTTAATGACTCTTTTAATGAAGCTATGGCTAGTGATGCGAGGTTGGTGATAAGTGTGGTGATTGATAGTTGTAAAGAGGTGTTTAAGGGTATTAAGTCTTTGGTGGATGTTGGTGGTGGCACTGGTTCTACAGCTAAGGCCATTGCTAATGCTTTTCCAGAAATTCAGTGTACTGTGTTTGATCTCCCGCATGTTGTTGAAGGATTACAAGGTTACGCCAATCTCAAGTTTGTTGGAGGAAACATGTTCGAGGCTGTTCCTCCTTCCGATGCCATCCTGATGAAGTGGATCCTACATGATTGGGTCGATGAGGAGTGCGTGAAAATTCTGAAGAATTGCAAGGAGGCAATTACAAGCAAAGGGGAAGGGGGAAAGCTGATTATAATAGACATGGTATTGGAGGAGGATGACGTTATGGTGAGAGACAAGAACAATAAATCAGTTGAGAATCAAATGTTGATTGATGTGCTGTTGATGGTTTTGTATCCTGGAAAAGAGAGGTCTGAGAAAGAATTGGCCAACTTGTTCCGTTCTGCTGGTTTCTCTTATTACAAGATTCATCATGTTCTCGGTTCACGATCTCTCATCGAGGTTTATCCATGA 1107 0.4345 MGSLNKQVIGESTRLINAQTHIWNHTFSFINSMSLKSAIDLNIPEIIHKHGKPMPLPLLISSLQIHPSKSPNIHRLMRLLTYSGFFCLQKLPESSEEEDQEGYVLTDSSTLLLKDHPLSATPFFLGMIDQALKKPWYELTNYLQSDEPSPFHMAYGSKIWECAKVDSKFNDSFNEAMASDARLVISVVIDSCKEVFKGIKSLVDVGGGTGSTAKAIANAFPEIQCTVFDLPHVVEGLQGYANLKFVGGNMFEAVPPSDAILMKWILHDWVDEECVKILKNCKEAITSKGEGGKLIIIDMVLEEDDVMVRDKNNKSVENQMLIDVLLMVLYPGKERSEKELANLFRSAGFSYYKIHHVLGSRSLIEVYP 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Accr13g01112 368 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 23 368 IPR016461 GO:0008168
Accr13g01112 368 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 118 367 IPR029063 -
Accr13g01112 368 Gene3D Vaccinia Virus protein VP39 113 368 IPR029063 -
Accr13g01112 368 PIRSF O-mtase 3 368 IPR016461 GO:0008168
Accr13g01112 368 Gene3D - 6 112 IPR036388 -
Accr13g01112 368 Pfam Dimerisation domain 33 81 IPR012967 GO:0046983
Accr13g01112 368 Pfam O-methyltransferase domain 136 350 IPR001077 GO:0008171
Accr13g01112 368 PANTHER O-METHYLTRANSFERASE 18 352 IPR016461 GO:0008168
Accr13g01112 368 FunFam Coniferyl alcohol 9-O-methyltransferase 6 112 - -
Accr13g01112 368 FunFam O-methyltransferase ZRP4 114 368 - -
Accr13g01112 368 SUPERFAMILY "Winged helix" DNA-binding domain 14 117 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Accr13g01112 Accr-Chr13 13853598 13855190 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Accr13g01112 33 354 Monolignol Biosynthesis Gene Families AT5G54160 36.474 4.14e-57 188
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Accr13g01112 - K16040 pvy:116109222 444.121